RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 GMNCA6NCL1 334 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 LRIT2A6NDA9 550 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 PLD2O14939 933 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CASC3O15234 703 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 HDAC3O15379 428 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 MYO1DO94832 1006 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 PDYNP01213 254 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 KITP10721 976 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CD22P20273 847 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SERPINB3P29508 390 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 RBMS1P29558 406 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 EIF2S3P41091 472 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 RAP1GDS1P52306 607 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ARFIP1P53367 373 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 GNGT1P63211 74 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CSTF3Q12996 717 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CUL3Q13618 768 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 C16orf72Q14CZ0 275 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 RTP5Q14D33 572 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ABRAXAS2Q15018 415 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 HERC3Q15034 1050 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 GPR19Q15760 415 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SPDYAQ5MJ70 313 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 DEPDC1Q5TB30 811 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 KANK2Q63ZY3 851 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CLEC6AQ6EIG7 209 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 FRMPD2BQ6IN97 320 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 RNF165Q6ZSG1 346 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 PAGE2Q7Z2X7 111 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 TRIM46Q7Z4K8 759 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CPLX4Q7Z7G2 160 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 OR4N4Q8N0Y3 316 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ANKRD53Q8N9V6 530 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 WDR20Q8TBZ3 569 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 NT5CQ8TCD5 201 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF473Q8WTR7 871 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 USP7Q93009 1102 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 RGMAQ96B86 450 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 NXPE2Q96DL1 559 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 TM4SF19Q96DZ7 209 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CHMP6Q96FZ7 201 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 METTL2AQ96IZ6 378 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SORT1Q99523 831 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SIKE1Q9BRV8 207 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 TRIM55Q9BYV6 548 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 B3GNT4Q9C0J1 378 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 C20orf27Q9GZN8 174 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SPRTNQ9H040 489 aaPredicted RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 NSRP1Q9H0G5 558 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF395Q9H8N7 513 aaPredicted RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 PNPOQ9NVS9 261 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 OCIAD1Q9NX40 245 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 CDC14AQ9UNH5 594 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 SRPK3Q9UPE1 567 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 TLN1Q9Y490 2541 aaKnown RBP9.68□□□□□ -0.86
NEDD9-214ENST00000513989 BSNQ9UPA5 3926 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 A0A1B0GTL3 188 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 ARHGAP10A1A4S6 786 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 MAGEB17A8MXT2 336 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 EDF1O60869 148 aaKnown RBP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 TGFB1P01137 390 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 LINC00032P0C843 101 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 PIM1P11309 404 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 FGF5P12034 268 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 PCSK2P16519 638 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 ALAS2P22557 587 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 AVPR1BP47901 424 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 PDX1P52945 283 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 MAPK10P53779 464 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 FOXA1P55317 472 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 RPS13P62277 151 aaKnown RBP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 CYP4F2P78329 520 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 FAM53BQ14153 422 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 MUM1Q2TAK8 710 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 AP5B1Q2VPB7 878 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 DEFB110Q30KQ9 67 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 UGT3A2Q3SY77 523 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 TRIM40Q6P9F5 258 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 FAM47EQ6ZV65 393 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 TMEM126BQ8IUX1 230 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 SNIP1Q8TAD8 396 aaKnown RBP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 CREB3L4Q8TEY5 395 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 TWIST2Q8WVJ9 160 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF501Q96CX3 271 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-214ENST00000513989 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF285Q96NJ3 590 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 KCNC2Q96PR1 638 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 KCNA7Q96RP8 456 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 TBCDQ9BTW9 1192 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 NRSN2Q9GZP1 204 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 SPNS1Q9H2V7 528 aa9.67□□□□□ -0.86
NEDD9-214ENST00000513989 PRORYQ9H606 182 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms