RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SOCS2O14508 198 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 OR1F1O43749 312 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CLEC3AO75596 197 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 EML2O95834 649 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 LDLRP01130 860 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 IGHV4-34P06331 123 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 UBTFL6P0CB48 400 aaPredicted RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 PEBP1P30086 187 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 BSGP35613 385 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 MC1RQ01726 317 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CHRNB3Q05901 458 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PDK3Q15120 406 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ALG11Q2TAA5 492 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 TMTC4Q5T4D3 741 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CPZQ66K79 652 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ERICH5Q6P6B1 374 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SYT13Q7L8C5 426 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PAGE2Q7Z2X7 111 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SPRED1Q7Z699 444 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZNF687Q8N1G0 1237 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PGBD3Q8N328 593 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 FLCNQ8NFG4 579 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 F2RL3Q96RI0 385 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SPATA9Q9BWV2 254 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SORBS1Q9BX66 1292 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 OSBPL11Q9BXB4 747 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 C6orf106Q9H6K1 298 aaPredicted RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 TPT1P8Q9HAU6 139 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SLC6A20Q9NP91 592 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 SCOCQ9UIL1 159 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 VPS4AQ9UN37 437 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CORO2BQ9UQ03 480 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 AK5Q9Y6K8 562 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PRAMEF26H0Y7S4 382 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 NDUFS4O43181 175 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 LCMT2O60294 686 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 GPR37L1O60883 481 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 PRSS23O95084 383 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CCNDBP1O95273 360 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 KCNK5O95279 499 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 C1QCP02747 245 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 IL3P08700 152 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 HOXB6P17509 224 aaKnown RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 EFNA1P20827 205 aaPredicted RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 GSTM2P28161 218 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SHMT2P34897 504 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ACTR1BP42025 376 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ACTR1AP61163 376 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 GAB1Q13480 694 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 MPEG1Q2M385 716 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CCNYL2Q5T2Q4 361 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 KIAA0895LQ68EN5 471 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 TMEM154Q6P9G4 183 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ENPP6Q6UWR7 440 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZNF852Q6ZMS4 543 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 RD3Q7Z3Z2 195 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 FAM86B1Q8N7N1 296 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 MFSD2AQ8NA29 543 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 OR2L3Q8NG85 312 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 OR4A15Q8NGL6 344 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CCL4L1Q8NHW4 92 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 FBXO30Q8TB52 745 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 NETO1Q8TDF5 533 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CREB3L4Q8TEY5 395 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZFP90Q8TF47 636 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 NCLNQ969V3 563 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SARGQ9BW04 601 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 CHST8Q9H2A9 424 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 MAGIXQ9H6Y5 334 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 YY1AP1Q9H869 796 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 TMEM184CQ9NVA4 438 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 OR6C2Q9NZP2 312 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
VCAN-211ENST00000513984 ZNF639Q9UID6 485 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ADAM29Q9UKF5 820 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 OAZ3Q9UMX2 235 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 DGKBQ9Y6T7 804 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 ACOX3O15254 700 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
VCAN-211ENST00000513984 TBX19O60806 448 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 RASGRP1O95267 797 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 ABCB1P08183 1280 aaPredicted RBP14.28□□□□□ -0.12
VCAN-211ENST00000513984 GSTM5P46439 218 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 RABIFP47224 123 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
VCAN-211ENST00000513984 NKG7Q16617 165 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 VMACQ2NL98 169 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 C6orf52Q5T4I8 152 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 UGT2A3Q6UWM9 527 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 Q6ZSR6 202 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 ADCK2Q7Z695 626 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 PTOV1Q86YD1 416 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms