RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 NT5C1B-RDH14C9J2C7 533 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 UPK3BL2E5RIL1 263 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 CAPN5O15484 640 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 PCDH7O60245 1069 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 KIAA0513O60268 411 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 EFEMP2O95967 443 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 ITGA2P17301 1181 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 POLR2EP19388 210 aaKnown RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 TCEA1P23193 301 aaKnown RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 AQP1P29972 269 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 HNF4AP41235 474 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 DOC2AQ14183 400 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 GCNT6Q5T4J0 391 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 RSBN1Q5VWQ0 802 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ZNF544Q6NX49 715 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 PRR23CQ6ZRP0 262 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 RNF130Q86XS8 419 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 UBQLNLQ8IYU4 475 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 Q8N9G6 341 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 B3GNT7Q8NFL0 401 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 CAPSLQ8WWF8 208 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNX25-205ENST00000512853 ECHDC3Q96DC8 303 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 SCRN2Q96FV2 425 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 MAPKAP1Q9BPZ7 522 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ATG10Q9H0Y0 220 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 C3orf14Q9HBI5 128 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 IMPAD1Q9NX62 359 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 CRNNQ9UBG3 495 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 FTSJ1Q9UET6 329 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ENOPH1Q9UHY7 261 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
SNX25-205ENST00000512853 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ZAR1LA6NP61 321 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 A8MX80 341 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 KPNA5O15131 536 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 CCNKO75909 580 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OPN1SWP03999 348 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 ADRA2AP08913 450 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 GSTM1P09488 218 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 C1SP09871 688 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 TNFRSF1BP20333 461 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 MAGP20916 626 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 CBLP22681 906 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 LHCGRP22888 699 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OR1D2P34982 312 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 TIE1P35590 1138 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 SLC15A1P46059 708 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 XCR1P46094 333 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 ALDH9A1P49189 494 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 CRISP3P54108 245 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 CDH12P55289 794 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 EEF1A2Q05639 463 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 TSTQ16762 297 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 XKR6Q5GH73 641 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 USP45Q70EL2 814 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 SPATC1Q76KD6 591 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 THOC6Q86W42 341 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 C1orf52Q8N6N3 182 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OR2AP1Q8NGE2 309 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OR52N2Q8NGI0 321 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OR4A15Q8NGL6 344 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 OR6F1Q8NGZ6 308 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 SKA2Q8WVK7 121 aaPredicted RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 TMCO6Q96DC7 493 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 BBS2Q9BXC9 721 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 BHLHE41Q9C0J9 482 aaPredicted RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 YIPF1Q9Y548 306 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 COL4A6Q14031 1691 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 KRT87PA6NCN2 255 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 PDZK1P1A8MUH7 402 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 E7EQ34 232 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 CCRL2O00421 344 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 MPZL2O60487 215 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 SLITRK5O94991 958 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 ETHE1O95571 254 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 KRT8P05787 483 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 RPL17P18621 184 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 ENDOUP21128 410 aaKnown RBP11.11□□□□□ -0.63
SNX25-205ENST00000512853 CD72P21854 359 aa11.11□□□□□ -0.63
SNX25-205ENST00000512853 TIA1P31483 386 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms