RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	MYOF	Q9NZM1	2061 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	MUC6	Q6W4X9	2439 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978		A0A1W2PQF6	199 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TMCO5B	A8MYB1	307 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978		F5H0A9	414 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SGK1	O00141	431 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SLC28A2	O43868	658 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SH3BP5	O60239	455 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	LUC7L3	O95232	432 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ADCY5	O95622	1261 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	APBB3	O95704	486 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	PLEK	P08567	350 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SPARC	P09486	303 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CISD3	P0C7P0	127 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	KRT3	P12035	628 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	FCGR1A	P12314	374 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SKIL	P12757	684 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	MAOA	P21397	527 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	RRM1	P23921	792 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	HLA-F	P30511	346 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CASP14	P31944	242 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	RDX	P35241	583 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	PDLIM4	P50479	330 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SEC61A1	P61619	476 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ZBED6	P86452	979 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SORD	Q00796	357 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	OLIG2	Q13516	323 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	NFATC4	Q14934	902 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CDO1	Q16878	200 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SLC25A52	Q3SY17	297 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	FUT11	Q495W5	492 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	EOGT	Q5NDL2	527 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	BRMS1L	Q5PSV4	323 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	RABGAP1L	Q5R372	815 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	MPP7	Q5T2T1	576 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SPECC1L	Q69YQ0	1117 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	PPP1R2P3	Q6NXS1	205 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CHST9	Q7L1S5	443 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ARC	Q7LC44	396 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF571	Q7Z3V5	609 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	BNIPL	Q7Z465	357 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TBC1D1	Q86TI0	1168 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	HAPLN4	Q86UW8	402 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	LONP2	Q86WA8	852 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	MFN1	Q8IWA4	741 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	LGI2	Q8N0V4	545 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	CARNMT1	Q8N4J0	409 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ATP6V0D2	Q8N8Y2	350 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TMEM116	Q8NCL8	245 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ZBTB44	Q8NCP5	570 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TSTD1	Q8NFU3	115 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	WFDC5	Q8TCV5	224 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	WFIKKN2	Q8TEU8	576 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TMED6	Q8WW62	240 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SYN2	Q92777	582 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	NT5C3B	Q969T7	300 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF653	Q96CK0	615 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TMA16	Q96EY4	203 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	PGAP3	Q96FM1	320 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	MCEE	Q96PE7	176 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ACOX2	Q99424	681 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	PRMT1	Q99873	361 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	GABRG3	Q99928	467 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	HAUS8	Q9BT25	410 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	C1QTNF5	Q9BXJ0	243 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SLC2A11	Q9BYW1	496 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ABCB8	Q9NUT2	735 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	ARHGEF38	Q9NXL2	777 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	TAS2R14	Q9NYV8	317 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	SELENON	Q9NZV5	590 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	GGA2	Q9UJY4	613 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.14	□□□□□ -1.59	7e-9	■■■□□ 14.9
MATR3-218	ENST00000511978	PSAT1	Q9Y617	370 aa		5.14	□□□□□ -1.59
MATR3-218	ENST00000511978	EML5	Q05BV3	1969 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	TCRBV21S2A2	A0A5A6	115 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	PRR23A	A6NEV1	266 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	SRRM3	A6NNA2	597 aa	Predicted RBP	5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	EIF3CL	B5ME19	914 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	PROB1	E7EW31	1015 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978		H0Y626	953 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	NDUFS7	O75251	213 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	FTCD	O95954	541 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	SERPING1	P05155	500 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	TPM1	P09493	284 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	IGHV4-30-4	P0DP06	118 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	GZMA	P12544	262 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	PDGFRA	P16234	1089 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	CHM	P24386	653 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	SSTR2	P30874	369 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	HOXA6	P31267	233 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	CD70	P32970	193 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	EIF2S3	P41091	472 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	DSCR9	P59020	149 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	KIF5A	Q12840	1032 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	SRSF5	Q13243	272 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	NAE1	Q13564	534 aa		5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	DHX34	Q14147	1143 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-218	ENST00000511978	FRG1	Q14331	258 aa	Known RBP	5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms