RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ZNF180Q9UJW8 692 aa15.25■□□□□ 0.03
PDLIM5-216ENST00000511767 G3BP2Q9UN86 482 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-216ENST00000511767 RP1L1Q8IWN7 2480 aaPredicted RBP15.25■□□□□ 0.03
PDLIM5-216ENST00000511767 A0A087WUV0 522 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 LRIT2A6NDA9 550 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 PCDH17O14917 1159 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 CLGNO14967 610 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 KLK8O60259 260 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 CCNT2O60583 730 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 KLHL41O60662 606 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 RDH16O75452 317 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 ZNF888P0CJ79 500 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 COX6A1P12074 109 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 ACPPP15309 386 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 IL10P22301 178 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 HNF4AP41235 474 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 XCR1P46094 333 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 GLRBP48167 497 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 SERPINB8P50452 374 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 RAB8AP61006 207 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 SLBPQ14493 270 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 TBCCQ15814 346 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 DEFB134Q4QY38 66 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 VWA5B1Q5TIE3 1220 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 FAAH2Q6GMR7 532 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 VN1R5Q7Z5H4 357 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 KRT78Q8N1N4 520 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 PSMF1Q92530 271 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 IMMP1LQ96LU5 166 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 PAFAH2Q99487 392 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 VN1R1Q9GZP7 353 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 ZNF700Q9H0M5 742 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 VPS11Q9H270 941 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 RHBGQ9H310 441 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 LANCL2Q9NS86 450 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 ZNF358Q9NW07 568 aa15.24■□□□□ 0.03
PDLIM5-216ENST00000511767 IGHV1-45A0A0A0MS14 117 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 SUPT3HB4E1H0 165 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 DPM1O60762 260 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 SUPT3HO75486 399 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 CLEC3AO75596 197 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 KRT38O76015 456 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 WISP1O95388 367 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 S100BP04271 92 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 ABHD2P08910 425 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 CD22P20273 847 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 ITGA3P26006 1051 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 GCAP28676 217 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 CHIT1Q13231 466 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 IGFBP7Q16270 282 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 PDK4Q16654 411 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 PLEKHN1Q494U1 663 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 XKR6Q5GH73 641 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 NIPAL1Q6NVV3 410 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 IGFL2Q6UWQ7 119 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 SNX31Q8N9S9 440 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 TTLQ8NG68 377 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 EXT2Q93063 718 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 PTCD3Q96EY7 689 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 PEX11GQ96HA9 241 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 THOC3Q96J01 351 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 SEC16BQ96JE7 1060 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 TRIM4Q9C037 500 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 LHPPQ9H008 270 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 ZNF160Q9HCG1 818 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 IKBKGQ9Y6K9 419 aa15.23■□□□□ 0.03
PDLIM5-216ENST00000511767 PRRC2CQ9Y520 2896 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 URADA6NGE7 173 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 ZNF860A6NHJ4 632 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 SYCE1LA8MT33 242 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 C4orf51C9J302 202 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 K7EPI3 171 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 RIPK2O43353 540 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 CYC1P08574 325 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 COL6A2P12110 1019 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 CNTFP26441 200 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 GSTM2P28161 218 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 CD97P48960 835 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 MLLT10P55197 1068 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 OLR1P78380 273 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 IRF8Q02556 426 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 LAPTM5Q13571 262 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 PCOLCEQ15113 449 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 ADPRMQ3LIE5 342 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 JMJD6Q6NYC1 403 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 ADGRD1Q6QNK2 874 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 TIFABQ6ZNK6 161 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 ABHD13Q7L211 337 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 LRRC70Q7Z2Q7 622 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 EIF1ADQ8N9N8 165 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 UBTD2Q8WUN7 234 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 METTL21AQ8WXB1 218 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 TBC1D20Q96BZ9 403 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 MS4A6EQ96DS6 147 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 OR1F2PQ96R84 312 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 LMF1Q96S06 567 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 EPB41L4BQ9H329 900 aa15.22■□□□□ 0.03
PDLIM5-216ENST00000511767 SCN2AQ99250 2005 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms