RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
RBM47-207ENST00000510871 AP3S1Q92572 193 aa13.1□□□□□ -0.31
RBM47-207ENST00000510871 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
RBM47-207ENST00000510871 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
RBM47-207ENST00000510871 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
RBM47-207ENST00000510871 SDR39U1Q9NRG7 319 aaPredicted RBP13.1□□□□□ -0.31
RBM47-207ENST00000510871 DLGAP4Q9Y2H0 992 aa13.1□□□□□ -0.31
RBM47-207ENST00000510871 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
RBM47-207ENST00000510871 SH3D21A4FU49 640 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 B3GALT2O43825 422 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 SNAP29O95721 258 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 BCHEP06276 602 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 HSD17B1P14061 328 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 RPS3P23396 243 aaKnown RBP eCLIP13.09□□□□□ -0.31
RBM47-207ENST00000510871 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ZNF285Q96NJ3 590 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 EFCAB9A8MZ26 197 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 HAT1O14929 419 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
RBM47-207ENST00000510871 JUPP14923 745 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 CSNK2A2P19784 350 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 MPIP34949 423 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 INHBCP55103 352 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 SCN1BQ07699 218 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 LETMD1Q6P1Q0 360 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ERN2Q76MJ5 926 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 FAM98AQ8NCA5 519 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 RNASE11Q8TAA1 199 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 TMIGD2Q96BF3 282 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 TVP23BQ9NYZ1 205 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 SNX7Q9UNH6 387 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 NPIPB15A6NHN6 443 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 TNFRSF10BO14763 440 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ABCB7O75027 752 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 RASAL1O95294 804 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 JUNP05412 331 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 AKT2P31751 481 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 GRM2Q14416 872 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 PON2Q15165 354 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 PKP4Q99569 1192 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 EVPLQ92817 2033 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 PPP6CO00743 305 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 PRMT3O60678 531 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 CRYZL1O95825 349 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 NAT2P11245 290 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 CYBRD1Q53TN4 286 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 SAMD14Q8IZD0 417 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 SOX17Q9H6I2 414 aaPredicted RBP13.09□□□□□ -0.31
RBM47-207ENST00000510871 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 CEPT1Q9Y6K0 416 aa13.09□□□□□ -0.31
RBM47-207ENST00000510871 CASKO14936 926 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 NDUFS4O43181 175 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 IFNGP01579 166 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 RPL34P49207 117 aaKnown RBP13.08□□□□□ -0.32
RBM47-207ENST00000510871 DOC2AQ14183 400 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 DHCR24Q15392 516 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 NDUFA9Q16795 377 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 LCN8Q6JVE9 175 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 DCDC5Q6ZRR9 648 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ANKFN1Q8N957 763 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 REEP4Q9H6H4 257 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 MLXQ9UH92 298 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ALPPP05187 535 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 YES1P07947 543 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ZNF630Q2M218 657 aaPredicted RBP13.08□□□□□ -0.32
RBM47-207ENST00000510871 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBM47-207ENST00000510871 GALNT12Q8IXK2 581 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 PGBD5Q8N414 524 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 MUS81Q96NY9 551 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ZIC5Q96T25 663 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 SLC2A11Q9BYW1 496 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 POFUT2Q9Y2G5 429 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
RBM47-207ENST00000510871 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
RBM47-207ENST00000510871 HOXC13P31276 330 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 LGALS3BPQ08380 585 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 IQCCQ4KMZ1 466 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
RBM47-207ENST00000510871 ASCC1Q8N9N2 400 aaKnown RBP13.08□□□□□ -0.32
RBM47-207ENST00000510871 SLC22A18Q96BI1 424 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms