RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MTFR2Q6P444 385 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 C17orf64Q86WR6 236 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 RPRMLQ8N4K4 120 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 ANKRD53Q8N9V6 530 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 C2CD4AQ8NCU7 369 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-202ENST00000509637 OR56A3Q8NH54 315 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 SMIM10Q96HG1 83 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 LPAR4Q99677 370 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 RUBCNLQ9H714 662 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 PARVBQ9HBI1 364 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 HCFC1P51610 2035 aa14.91□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF407Q9C0G0 2248 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 MAGEB16A2A368 324 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 A8MUA0 341 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 TGFBR3LH3BV60 316 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 NDC80O14777 642 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 PFDN6O15212 129 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 NRDCO43847 1150 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 KRT38O76015 456 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 AHSGP02765 367 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 FHP07954 510 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 ZNF888P0CJ79 500 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-202ENST00000509637 CD46P15529 392 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 MAOAP21397 527 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 ARMC3Q5W041 872 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 C16orf47Q6ZP98 133 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-202ENST00000509637 RASGEF1CQ8N431 466 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 MCOLN3Q8TDD5 553 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 UTP15Q8TED0 518 aaKnown RBP14.9□□□□□ -0.02
RAB40C-202ENST00000509637 TBC1D20Q96BZ9 403 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 MAGED4Q96JG8 741 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 OR1F2PQ96R84 312 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 VPS9D1Q9Y2B5 631 aa14.9□□□□□ -0.02
RAB40C-202ENST00000509637 EML6Q6ZMW3 1958 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 OR1F1O43749 312 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 PRKNO60260 465 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SLC25A12O75746 678 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 ALOX12P18054 663 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SCTRP47872 440 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SMSP52788 366 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 ITGA8P53708 1063 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 RIPPLY3P57055 190 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 ARMC10Q8N2F6 343 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 APCDD1LQ8NCL9 501 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 MAIP1Q8WWC4 291 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 NEIL2Q969S2 332 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 MAGOHBQ96A72 148 aaKnown RBP14.89□□□□□ -0.03
RAB40C-202ENST00000509637 C14orf79Q96F83 325 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SNF8Q96H20 258 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SPOCK3Q9BQ16 436 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 WDR83Q9BRX9 315 aaKnown RBP14.89□□□□□ -0.03
RAB40C-202ENST00000509637 CCDC68Q9H2F9 335 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 NPDC1Q9NQX5 325 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SAMD15Q9P1V8 674 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
RAB40C-202ENST00000509637 SPG11Q96JI7 2443 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 INTS1Q8N201 2190 aaKnown RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 A0A1B0GTH9 108 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TRBC2A0A5B9 178 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PINLYPA6NC86 204 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TMEM200CA6NKL6 621 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 E9PLN8 166 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 EIF3FO00303 357 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 NDUFS4O43181 175 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 MYBL2P10244 700 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 IGFBP2P18065 325 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PPP2R1BP30154 601 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TRHRP34981 398 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 HNF4AP41235 474 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 GPR143P51810 404 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 HNRNPFP52597 415 aaKnown RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 CASP6P55212 293 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 RAB8AP61006 207 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 CYP1B1Q16678 543 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 CMPK2Q5EBM0 449 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 EMC4Q5J8M3 183 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 MDGA2Q7Z553 956 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 SULF2Q8IWU5 870 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 CYP4X1Q8N118 509 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 LGI4Q8N135 537 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 GHDCQ8N2G8 530 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 SLC5A8Q8N695 610 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TMEM178AQ8NBL3 297 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TMEM52Q8NDY8 209 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 NT5CQ8TCD5 201 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PHF10Q8WUB8 498 aaKnown RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 SDCCAG3Q96C92 435 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 LINGO1Q96FE5 620 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PWWP2AQ96N64 755 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PTCHD1Q96NR3 888 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 OLFM1Q99784 485 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 VKORC1Q9BQB6 163 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 PCBD2Q9H0N5 130 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 XAB2Q9HCS7 855 aaKnown RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 DEPPQ9NTK1 212 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 TRMT6Q9UJA5 497 aaKnown RBP14.88□□□□□ -0.03
RAB40C-202ENST00000509637 COMMD10Q9Y6G5 202 aa14.88□□□□□ -0.03
RAB40C-202ENST00000509637 DNAJC13O75165 2243 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms