RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MRM3Q9HC36 420 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CCNB1IP1Q9NPC3 277 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CD93Q9NPY3 652 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 WASH6PQ9NQA3 447 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RAB20Q9NX57 234 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 BARHL2Q9NY43 387 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SMPD3Q9NY59 655 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 WARS2Q9UGM6 360 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 MAD2L2Q9UI95 211 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KLHL21Q9UJP4 597 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ACSL5Q9ULC5 683 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 COG5Q9UP83 839 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 RNF11Q9Y3C5 154 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HEMK1Q9Y5R4 338 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PEX16Q9Y5Y5 336 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 COL1A1P02452 1464 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 DOCK2Q92608 1830 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ARAP2Q8WZ64 1704 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUOX1Q9NRD9 1551 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RNF103-CHMP3A0A140T963 221 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1B0GVM2 712 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1B0GW55 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 HEATR9A2RTY3 570 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ANKRD63C9JTQ0 380 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CLDN3O15551 220 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CCNT1O60563 726 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 AVILO75366 819 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 GABARAPO95166 117 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NDUFB8O95169 186 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SNAPINO95295 136 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NTSR2O95665 410 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 APOC1P02654 83 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NR3C1P04150 777 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L2P0CJ85 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L3P0CJ86 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L4P0CJ87 422 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L5P0CJ88 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L6P0CJ89 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4L7P0CJ90 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TGFB3P10600 412 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC2A3P11169 496 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC5A1P13866 664 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ST6GAL1P15907 406 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NCF2P19878 526 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RAB3AP20336 220 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TGM2P21980 687 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DNAJB1P25685 340 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 MAPK4P31152 587 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RCVRNP35243 200 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SERPINB5P36952 375 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 GARSP41250 739 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 YAP1P46937 504 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 KCNJ1P48048 391 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FMO5P49326 533 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ALDH7A1P49419 539 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NUMBP49757 651 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ARSEP51690 589 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NDST1P52848 882 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC12A2P55011 1212 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PSMD4P55036 377 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PEX3P56589 373 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 OR2B6P58173 313 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RAB14P61106 215 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 VBP1P61758 197 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RPL10AP62906 217 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CDKL1Q00532 357 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 GALK2Q01415 458 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 MYL7Q01449 175 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FLI1Q01543 452 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 GPS1Q13098 491 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 MTAPQ13126 283 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PMS2P3Q13401 168 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 BFSP2Q13515 415 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FHL3Q13643 280 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 POLD3Q15054 466 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TBRG1Q3YBR2 411 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 BRMS1LQ5PSV4 323 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF600Q6ZNG1 722 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM26Q6ZUK4 368 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CCDC149Q6ZUS6 474 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CYS1Q717R9 158 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DSG4Q86SJ6 1040 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 NOXA1Q86UR1 476 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RAB43Q86YS6 212 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 MICU2Q8IYU8 434 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TCTE3Q8IZS6 198 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 LINC00518Q8N0U6 118 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RBMXL3Q8N7X1 1067 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 POC5Q8NA72 575 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 XXYLT1Q8NBI6 393 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM156AQ8NDB6 213 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 OR5H6Q8NGV6 325 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 OR6F1Q8NGZ6 308 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 VANGL1Q8TAA9 524 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RDH11Q8TC12 318 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FANK1Q8TC84 345 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ZFAND1Q8TCF1 268 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM174Q8WUU8 243 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms