RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
PROM1-207ENST00000508167 RNF11Q9Y3C5 154 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 RP1P56715 2156 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 IGHV1OR21-1A0A087WYE8 117 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 EEDO75530 441 aaKnown RBP10.54□□□□□ -0.72
PROM1-207ENST00000508167 CAPN1P07384 714 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 ME2P23368 584 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 CAPZBP47756 277 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 UFM1P61960 85 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 PRDX1Q06830 199 aaKnown RBP10.54□□□□□ -0.72
PROM1-207ENST00000508167 VPS26BQ4G0F5 336 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 C6orf136Q5SQH8 315 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 FIGLAQ6QHK4 219 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 OR4F6Q8NGB9 312 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 CDC26Q8NHZ8 85 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 UBE2E3Q969T4 207 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 PPM1MQ96MI6 270 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 LRRN3Q9H3W5 708 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 EPB41L1Q9H4G0 881 aa10.54□□□□□ -0.72
PROM1-207ENST00000508167 WDFY4Q6ZS81 3184 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 FAM221BA6H8Z2 402 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 ULK1O75385 1050 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 HSD17B1P14061 328 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 CSTF2P33240 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
PROM1-207ENST00000508167 NOVA1P51513 510 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 PPP1CAP62136 330 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 ABATP80404 500 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 TRIP6Q15654 476 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 PDCD4Q53EL6 469 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 SPESP1Q6UW49 350 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 PTRH1Q86Y79 214 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 EPHX4Q8IUS5 362 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 MSRB3Q8IXL7 192 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 USP7Q93009 1102 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 REPS1Q96D71 796 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 NUDT22Q9BRQ3 303 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 FARSBQ9NSD9 589 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 C6orf203Q9P0P8 240 aaPredicted RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 SNX6Q9UNH7 406 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 PCDHGB2Q9Y5G2 931 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 C7orf72A4D263 438 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 DENRO43583 198 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 KIF1CO43896 1103 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 C1GALT1C1LP0DN25 315 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 NPPBP16860 134 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 SLC6A12P48065 614 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 TRAP1Q12931 704 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 DOC2AQ14183 400 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 LCTLQ6UWM7 567 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 ADGRF3Q8IZF5 1079 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 OR2L3Q8NG85 312 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 MTERF1Q99551 399 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 CXorf56Q9H5V9 222 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 TRBV5-3A0A0A0MS03 114 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 A0A0J9YY10 115 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 B4GAT1O43505 415 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 TNFSF14O43557 240 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 CKMT1AP12532 417 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 HRH2P25021 359 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 PTPN6P29350 595 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 RHDQ02161 417 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 DEFB110Q30KQ9 67 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 NXPE4Q6UWF7 544 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 SPRED1Q7Z699 444 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 FAM181AQ8N9Y4 354 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 RSRC1Q96IZ7 334 aaKnown RBP10.53□□□□□ -0.72
PROM1-207ENST00000508167 SLC25A23Q9BV35 468 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 PDE7BQ9NP56 450 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 SPAG4Q9NPE6 437 aa10.53□□□□□ -0.72
PROM1-207ENST00000508167 BBIP1A8MTZ0 92 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 GIMD1P0DJR0 217 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 CD59P13987 128 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 EPHA4P54764 986 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 ZRSR2Q15696 482 aaKnown RBP10.52□□□□□ -0.72
PROM1-207ENST00000508167 GSTA3Q16772 222 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 RFTN2Q52LD8 501 aaPredicted RBP10.52□□□□□ -0.72
PROM1-207ENST00000508167 TMIGD1Q6UXZ0 262 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 GPR155Q7Z3F1 870 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 GPR135Q8IZ08 494 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 RNF31Q96EP0 1072 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 C11orf24Q96F05 449 aaPredicted RBP10.52□□□□□ -0.72
PROM1-207ENST00000508167 FCRL1Q96LA6 429 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 NDOR1Q9UHB4 597 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 PCDHGA11Q9Y5H2 935 aa10.52□□□□□ -0.72
PROM1-207ENST00000508167 CEP250Q9BV73 2442 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 NPIPB8E9PQR5 432 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 MRASO14807 208 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 LYNP07948 512 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 NEK2P51955 445 aa10.52□□□□□ -0.73
PROM1-207ENST00000508167 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
PROM1-207ENST00000508167 LAPTM5Q13571 262 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms