RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 NPPBP16860 134 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 IL1RNP18510 177 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 AGXTP21549 392 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 VIPR1P32241 457 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 LTBRP36941 435 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 SLC6A12P48065 614 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 PLA2G16P53816 162 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 C21orf59P57076 290 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 TBPL1P62380 186 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 DUSP2Q05923 314 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 CD47Q08722 323 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 SPIDRQ14159 915 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 CLCA4Q14CN2 919 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 AGERQ15109 404 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 CTU2Q2VPK5 515 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 PPP2R2DQ66LE6 453 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 AGTRAPQ6RW13 159 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 KIAA0907Q7Z7F0 614 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 ZNF554Q86TJ5 538 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 HIPK1Q86Z02 1210 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 PLPP6Q8IY26 295 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 ARL10Q8N8L6 244 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 ANKRD53Q8N9V6 530 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 PSD4Q8NDX1 1056 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 GIPC3Q8TF64 312 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 RLN3Q8WXF3 142 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 TANKQ92844 425 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 RELTQ969Z4 430 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 LYSMD1Q96S90 227 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 CPPED1Q9BRF8 314 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 OSGEPL1Q9H4B0 414 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 KLHL31Q9H511 634 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 ELOVL6Q9H5J4 265 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 GPN2Q9H9Y4 310 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 FAIMQ9NVQ4 179 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 DNAAF2Q9NVR5 837 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 TBCCD1Q9NVR7 557 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 SIRT5Q9NXA8 310 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 RHCGQ9UBD6 479 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 PSME2Q9UL46 239 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 SNX6Q9UNH7 406 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 MAN2B2Q9Y2E5 1009 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 ORC6Q9Y5N6 252 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 SNX5Q9Y5X3 404 aa4.42□□□□□ -1.7
ATP2C1-212ENST00000507488 NCOR1O75376 2440 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 SHISA7A6NL88 538 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 GABRR3A8MPY1 467 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 H7BY64 318 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 POP7O75817 140 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PAPLNO95428 1278 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 HIST1H2AGP0C0S8 130 aaPredicted RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 TFPTP0C1Z6 253 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 MYF5P13349 255 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 ACP5P13686 325 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 HIST1H2ADP20671 130 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PTPN5P54829 565 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 TAGLNQ01995 201 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 MVKQ03426 396 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PPIGQ13427 754 aaKnown RBP eCLIP4.41□□□□□ -1.71e-6■■■□□ 19.2
ATP2C1-212ENST00000507488 GBX1Q14549 363 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 ARHGEF6Q15052 776 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 CDKL4Q5MAI5 379 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 MPP7Q5T2T1 576 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 COL13A1Q5TAT6 717 aaPredicted RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 AGBL4Q5VU57 503 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 ZNF691Q5VV52 312 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 GTF2IRD2BQ6EKJ0 949 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 CES5AQ6NT32 575 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 TTC23LQ6PF05 361 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 C16orf87Q6PH81 154 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 LRRC70Q7Z2Q7 622 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 ZNF438Q7Z4V0 828 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 TSEN54Q7Z6J9 526 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 GTF2IRD2Q86UP8 949 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 SYTL1Q8IYJ3 562 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 FAM9CQ8IZT9 166 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 DDHD1Q8NEL9 900 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 SNRNP27Q8WVK2 155 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 REXO5Q96IC2 774 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PLEKHA8Q96JA3 519 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 HIST1H2AHQ96KK5 128 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 COQ10AQ96MF6 247 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PRAP1Q96NZ9 151 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 CSF3RQ99062 836 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 HIST1H2AJQ99878 128 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 H2AFJQ9BTM1 129 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 REXO4Q9GZR2 422 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 SPHK1Q9NYA1 384 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 WARS2Q9UGM6 360 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 RAPGEFL1Q9UHV5 662 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PPIL1Q9Y3C6 166 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 GPR179Q6PRD1 2367 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PLXNA2O75051 1894 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 CABIN1Q9Y6J0 2220 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 KRBA1A5PL33 1030 aa4.41□□□□□ -1.7
ATP2C1-212ENST00000507488 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms