RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 POMT2Q9UKY4 750 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 COLEC10Q9Y6Z7 277 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 C13orf42A0A1B0GVH6 325 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 GTPBP10A4D1E9 387 aaKnown RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 ZNF732B4DXR9 585 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 MAGEB2O15479 319 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 TLX2O43763 284 aaPredicted RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 EDIL3O43854 480 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 ZG16O60844 167 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 LRCH4O75427 683 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 HMOX1P09601 288 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 SELEP16581 610 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 OR3A3P47888 321 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 SERPINH1P50454 418 aaKnown RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 KIAA1024LP59773 190 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 SNRPD1P62314 119 aaKnown RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 CETN1Q12798 172 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 CDH18Q13634 790 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 RPS6KA1Q15418 735 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 TAB1Q15750 504 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 ARMCX4Q5H9R4 360 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 LRRC38Q5VT99 294 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 KCTD11Q693B1 232 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 TRMT11Q7Z4G4 463 aaKnown RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 PRSS42Q7Z5A4 293 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 CNTN4Q8IWV2 1026 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 UNC45BQ8IWX7 931 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 RAB42Q8N4Z0 105 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 TEX26Q8N6G2 289 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 MSANTD4Q8NCY6 345 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 MRGPRDQ8TDS7 321 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 FAM46BQ96A09 425 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 NYXQ9GZU5 481 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 CUEDC2Q9H467 287 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 RPF1Q9H9Y2 349 aaKnown RBP2.97□□□□□ -1.93
LSM6-205ENST00000507449 MID1IP1Q9NPA3 183 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 PDRG1Q9NUG6 133 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 EXOC1Q9NV70 894 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 DNAJC11Q9NVH1 559 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 SATB2Q9UPW6 733 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 PPP1R3CQ9UQK1 317 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 SNX5Q9Y5X3 404 aa2.97□□□□□ -1.93
LSM6-205ENST00000507449 ARID2Q68CP9 1835 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 MAGEB16A2A368 324 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 LINC01565O15544 149 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 CRCPO75575 148 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 RAD51DO75771 328 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 OLFM2O95897 454 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 IGLV1-44P01699 117 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 SBK2P0C263 348 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 AADACP22760 399 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 GJB2P29033 226 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 OR1D2P34982 312 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 CTNNB1P35222 781 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 CLCN4P51793 760 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 UCP2P55851 309 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 YBEYP58557 167 aaPredicted RBP2.96□□□□□ -1.94
LSM6-205ENST00000507449 SGCGQ13326 291 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 PPA1Q15181 289 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 FUT11Q495W5 492 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 ZFP69Q49AA0 526 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 ODF2Q5BJF6 829 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 FIP1L1Q6UN15 594 aaKnown RBP2.96□□□□□ -1.94
LSM6-205ENST00000507449 C17orf107Q6ZR85 190 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 Q6ZTC4 211 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 LAX1Q8IWV1 398 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 SPC24Q8NBT2 197 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 CLEC1AQ8NC01 280 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 LPCAT1Q8NF37 534 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 ARHGAP45Q92619 1136 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 CASP10Q92851 521 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 SNX21Q969T3 373 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 MAGED4Q96JG8 741 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 LURAP1Q96LR2 239 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 DUX3Q96PT4 197 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 ZNF300Q96RE9 604 aaPredicted RBP2.96□□□□□ -1.94
LSM6-205ENST00000507449 CLEC7AQ9BXN2 247 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 IDI2Q9BXS1 227 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 DPEP2Q9H4A9 486 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 FNDC4Q9H6D8 234 aaPredicted RBP2.96□□□□□ -1.94
LSM6-205ENST00000507449 TMOD3Q9NYL9 352 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 MIS18AQ9NYP9 233 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 MDFICQ9P1T7 246 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 KLHL8Q9P2G9 620 aaPredicted RBP2.96□□□□□ -1.94
LSM6-205ENST00000507449 TRPC4Q9UBN4 977 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 POLKQ9UBT6 870 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 PSORS1C1Q9UIG5 152 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 STX8Q9UNK0 236 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 NCKAP1Q9Y2A7 1128 aa2.96□□□□□ -1.94
LSM6-205ENST00000507449 NPHP3Q7Z494 1330 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 CCDC162PA2VCL2 907 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 TRIM64A6NGJ6 449 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 TRIM64BA6NI03 449 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 LMO7DNF2Z398 122 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 NPIPB9F8W1W9 429 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 G3V2L1 256 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 VEGFDO43915 354 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 MAGEC1O60732 1142 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 LETM1O95202 739 aaPredicted RBP2.95□□□□□ -1.94
LSM6-205ENST00000507449 ODC1P11926 461 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms