RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 LPGAT1Q92604 370 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 SLC35B4Q969S0 331 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 NACC2Q96BF6 587 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MTBPQ96DY7 904 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MFSD3Q96ES6 412 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 FOPNLQ96NB1 174 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 IP6K3Q96PC2 410 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 NRTNQ99748 197 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MIPEPQ99797 713 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 RAB11FIP5Q9BXF6 653 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 SLC7A5P2Q9GIP4 190 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CLMPQ9H6B4 373 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF71Q9NQZ8 489 aaPredicted RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TBC1D23Q9NUY8 699 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 INTS7Q9NVH2 962 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 SYBUQ9NX95 663 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TAS2R1Q9NYW7 299 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 KLHL42Q9P2K6 505 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TAGLN3Q9UI15 199 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TLK1Q9UKI8 766 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TCFL5Q9UL49 500 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 SNX7Q9UNH6 387 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PLCL2Q9UPR0 1127 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MAN2B2Q9Y2E5 1009 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PCDHGB7Q9Y5F8 929 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PCDHGA9Q9Y5G4 932 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MYO18BQ8IUG5 2567 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 C9J4A7 227 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 HNRNPRO43390 633 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SRPX2O60687 465 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 AVILO75366 819 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 TRMUO75648 421 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 KLF7O75840 302 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PDE5AO76074 875 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MATN4O95460 622 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 CBX6O95503 412 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 C1orf105O95561 183 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 ONECUT2O95948 504 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 UBTFL6P0CB48 400 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 COL8A1P27658 744 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PRDX6P30041 224 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 FMO4P31512 558 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MAGEA4P43358 317 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 ARSFP54793 590 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 CSE1LP55060 971 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 DCDP81605 110 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 NFKB2Q00653 900 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 TLE1Q04724 770 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 GBX1Q14549 363 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SSPNQ14714 243 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 NCF4Q15080 339 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PDK3Q15120 406 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SF1Q15637 639 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 TRIP13Q15645 432 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MMEL1Q495T6 779 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF468Q5VIY5 522 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PRAMEF17Q5VTA0 474 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 YOD1Q5VVQ6 348 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 LCN10Q6JVE6 187 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 TTC27Q6P3X3 843 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 Q6ZNX1 250 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 FAM47EQ6ZV65 393 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MED25Q71SY5 747 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PTRH1Q86Y79 214 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 HPS6Q86YV9 775 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 CILP2Q8IUL8 1156 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MCATQ8IVS2 390 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 TMEM102Q8N9M5 508 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 LMNTD1Q8N9Z9 388 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 LINC01555Q8NAE3 123 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MINDY2Q8NBR6 621 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 LKAAEAR1Q8TD35 194 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 RNF31Q96EP0 1072 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 C7orf26Q96N11 449 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 OLFM1Q99784 485 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SPRTNQ9H040 489 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 KLHL25Q9H0H3 589 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 MANSC1Q9H8J5 431 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 S100A14Q9HCY8 104 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 ASH1LQ9NR48 2969 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 INTS10Q9NVR2 710 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 HEY2Q9UBP5 337 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SLC39A10Q9ULF5 831 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 FAF1Q9UNN5 650 aaPredicted RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SRPK3Q9UPE1 567 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 CHMP2BQ9UQN3 213 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 PADI2Q9Y2J8 665 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 KLK4Q9Y5K2 254 aa7.68□□□□□ -1.18
SCN1A-207ENST00000507401 SETXQ7Z333 2677 aaKnown RBP7.68□□□□□ -1.18
SCN1A-207ENST00000507401 IQANK1A0A1B0GTG1 560 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 TMEM247A6NEH6 219 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 GOLGA8TH3BQL2 631 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 LSM1O15116 133 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 HCRTR1O43613 425 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 KLHL41O60662 606 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CEACAM4O75871 244 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 USP1O94782 785 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 TMEM63AO94886 807 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 IGHEP01854 428 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms