RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 POLHQ9Y253 713 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 PTRH2Q9Y3E5 179 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 MAU2Q9Y6X3 613 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 A0A0A6YYC8 382 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 SMIM23A6NLE4 172 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 STX16-NPEPL1H3BU86 382 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 I3L1I5 382 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 GOLGA8RI6L899 631 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 PEX12O00623 359 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 STX16O14662 325 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 KLK8O60259 260 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 KLF7O75840 302 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 NUDT17P0C025 328 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 MTHFD2P13995 350 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 FBLP22087 321 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 CASP2P42575 452 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 SLCO1A2P46721 670 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 AGTR2P50052 363 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 STXBP1P61764 594 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 RPS18P62269 152 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 REEP5Q00765 189 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 CHIT1Q13231 466 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 HERC3Q15034 1050 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 PCBP2Q15366 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
GYPB-206ENST00000506516 NKG7Q16617 165 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 TBR1Q16650 682 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 FBXO48Q5FWF7 155 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 FAM198BQ6UWH4 519 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 ABHD13Q7L211 337 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 VN1R4Q7Z5H5 301 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 RIBC1Q8N443 379 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 METTL27Q8N6F8 245 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 TEX9Q8N6V9 391 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 PTGR2Q8N8N7 351 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 KCT2Q8NC54 265 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 ZNF740Q8NDX6 193 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 OR2Y1Q8NGV0 311 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 NT5CQ8TCD5 201 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 AENQ8WTP8 325 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 UBTD2Q8WUN7 234 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 APOBEC4Q8WW27 367 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 EXTL1Q92935 676 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 ATP6V1E2Q96A05 226 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 MIEF2Q96C03 454 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 PHF21BQ96EK2 531 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 C10orf90Q96M02 699 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 FER1L6-AS2Q96M78 137 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 DMRTB1Q96MA1 342 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 RUFY1Q96T51 708 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 MACROD1Q9BQ69 325 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 EFCAB11Q9BUY7 163 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 SLC26A1Q9H2B4 701 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 MKKSQ9NPJ1 570 aaPredicted RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 SLC22A11Q9NSA0 550 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 GEMIN8Q9NWZ8 242 aaKnown RBP6.9□□□□□ -1.3
GYPB-206ENST00000506516 XPR1Q9UBH6 696 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 RAB21Q9UL25 225 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 MAN2B2Q9Y2E5 1009 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 SLC22A7Q9Y694 548 aa6.9□□□□□ -1.3
GYPB-206ENST00000506516 SDK2Q58EX2 2172 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 DSPP15924 2871 aaKnown RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 A0A088AWK7 358 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 A0A1W2PPM1 405 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 VSTM2BA6NLU5 285 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 P2RX6O15547 441 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 FOXS1O43638 330 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 UGDHO60701 494 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 GLRA3O75311 464 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ERLIN1O75477 346 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 CLEC3AO75596 197 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 MED26O95402 600 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 STATHP02808 62 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 HEXBP07686 556 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 SERPINA6P08185 405 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 FURINP09958 794 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ZGLP1P0C6A0 271 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ALOX12P18054 663 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ZNF10P21506 573 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 IL10P22301 178 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 SERPINB1P30740 379 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 OTX2P32243 289 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ARL1P40616 181 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 HNF4AP41235 474 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 RRADP55042 308 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 NFKB2Q00653 900 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 TNP2Q05952 138 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 TGM3Q08188 693 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 GTF2H2Q13888 395 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 COL9A2Q14055 689 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 DOC2AQ14183 400 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 SLBPQ14493 270 aaKnown RBP eCLIP6.89□□□□□ -1.31
GYPB-206ENST00000506516 LIPJQ5W064 366 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms