RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZNF480Q8WV37 535 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 LTBP1Q14766 1721 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 H3BNH8 94 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 PSMD11O00231 422 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 NME4O00746 187 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 NUAK1O60285 661 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 CHRM5P08912 532 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 DBTP11182 482 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 TARDBPQ13148 414 aaKnown RBP eCLIP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SLAMF1Q13291 335 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 DAG1Q14118 895 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 IRAK1BP1Q5VVH5 260 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 AFMIDQ63HM1 303 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SLC9B2Q86UD5 537 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 KBTBD2Q8IY47 623 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 DDHD1Q8NEL9 900 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 POP5Q969H6 163 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 UHRF1Q96T88 793 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SORBS1Q9BX66 1292 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 MYO10Q9HD67 2058 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SLC25A12O75746 678 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 DRD1P21728 446 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 CAPGP40121 348 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SLC14A2Q15849 920 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 DEFB110Q30KQ9 67 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 ANKRD54Q6NXT1 300 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SMARCD3Q6STE5 483 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 UTP4Q969X6 686 aaKnown RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 TMEM27Q9HBJ8 222 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 CCNB2O95067 398 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 PSMB5P28074 263 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 HOXA9P31269 272 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 PTGER1P34995 402 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 KHKP50053 298 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 CLDN8P56748 225 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 OR2T5Q6IEZ7 315 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 GALNT18Q6P9A2 607 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 Q6ZSR6 202 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ERMP1Q7Z2K6 904 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF551Q7Z340 670 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 SPRED2Q7Z698 418 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 GPR149Q86SP6 731 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 OR2T29Q8NH02 315 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF483Q8TF39 744 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ART5Q96L15 291 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 CAPN14A8MX76 684 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 UGT2B11O75310 529 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 OR6B1O95007 311 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 NR1D2Q14995 579 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 IQCHQ86VS3 1027 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 MYDGFQ969H8 173 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 SARDHQ9UL12 918 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 GREB1LQ9C091 1923 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 IL1RNP18510 177 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 CDK9P50750 372 aaKnown RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 BLVRAP53004 296 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 OLR1P78380 273 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 BLMHQ13867 455 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 MLIPQ5VWP3 458 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 B3GNT6Q6ZMB0 384 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ADIPOR2Q86V24 386 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 SAMD14Q8IZD0 417 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ZCCHC7Q8N3Z6 543 aaKnown RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 PIGKQ92643 395 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 FATE1Q969F0 183 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
TCOF1-207ENST00000504761 CAMK1GQ96NX5 476 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 ACPTQ9BZG2 426 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
TCOF1-207ENST00000504761 TMEM150CB9EJG8 249 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 E2F3O00716 465 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 UBFD1O14562 309 aaKnown RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 ALDOCP09972 364 aaKnown RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MAVSQ7Z434 540 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 ADGRG6Q86SQ4 1221 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 LGI4Q8N135 537 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 OR8H2Q8N162 312 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MAL2Q969L2 176 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 PYURFQ96I23 114 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TGM7Q96PF1 710 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 INPP5KQ9BT40 448 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 K7ESM1 405 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 LINC01565O15544 149 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MMP12P39900 470 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms