RNA–Protein interactions for RNA: ENST00000503732.1

SIL1-204, Transcript of SIL1 nucleotide exchange factor, human

TSL 3

Gene SIL1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIL1-204	ENST00000503732	TAAR6	Q96RI8	345 aa		13.65	□□□□□ -0.22
SIL1-204	ENST00000503732	CNOT10	Q9H9A5	744 aa	Known RBP	13.65	□□□□□ -0.22
SIL1-204	ENST00000503732	ENTPD4	Q9Y227	616 aa		13.65	□□□□□ -0.22
SIL1-204	ENST00000503732	TEX264	Q9Y6I9	313 aa		13.65	□□□□□ -0.22
SIL1-204	ENST00000503732	CPAMD8	Q8IZJ3	1885 aa		13.65	□□□□□ -0.22
SIL1-204	ENST00000503732	MYO9A	B2RTY4	2548 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CCL21	O00585	134 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	FCHO1	O14526	889 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CHST10	O43529	356 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	BANF1	O75531	89 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TSPAN12	O95859	305 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	SERPINA6	P08185	405 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	ZNF37A	P17032	561 aa	Predicted RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	COL8A1	P27658	744 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	SCTR	P47872	440 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TDGF1P3	P51864	188 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	KCNK10	P57789	538 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	ALDH6A1	Q02252	535 aa	Known RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CALCOCO2	Q13137	446 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	ART3	Q13508	389 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	RCN2	Q14257	317 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	USP10	Q14694	798 aa	Known RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	RBBP5	Q15291	538 aa	Known RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	OR1C1	Q15619	314 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	MSS51	Q4VC12	460 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	C1QL3	Q5VWW1	255 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	QSOX2	Q6ZRP7	698 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TMPRSS11B	Q86T26	416 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	THOC6	Q86W42	341 aa	Known RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CYP4X1	Q8N118	509 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	KRT78	Q8N1N4	520 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TCAIM	Q8N3R3	496 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	AFAP1L2	Q8N4X5	818 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	TSPAN17	Q96FV3	270 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	SEC16B	Q96JE7	1060 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	NAPG	Q99747	312 aa	Predicted RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	GRPEL1	Q9HAV7	217 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	POPDC3	Q9HBV1	291 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CHST11	Q9NPF2	352 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	CTNNAL1	Q9UBT7	734 aa		13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	MRPS33	Q9Y291	106 aa	Known RBP	13.64	□□□□□ -0.23
SIL1-204	ENST00000503732	ITPR2	Q14571	2701 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	FAM95C	A0A1B0GW59	222 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	ZNF860	A6NHJ4	632 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	GABRR3	A8MPY1	467 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	EFCAB8	A8MWE9	144 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PRSS44	E7EML9	344 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	CLDN4	O14493	209 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	B4GALT2	O60909	372 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SEC31A	O94979	1220 aa	Known RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	ZNF888	P0CJ79	500 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	IVD	P26440	423 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SMS	P52788	366 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	ITGA8	P53708	1063 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SLC26A5	P58743	744 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	RHAG	Q02094	409 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SRSF11	Q05519	484 aa	Known RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PDIA2	Q13087	525 aa	Known RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	TUBA3C	Q13748	450 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	CATSPERE	Q5SY80	951 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	STEAP4	Q687X5	459 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	FCRLB	Q6BAA4	426 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	TUBA3E	Q6PEY2	450 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	NXPE4	Q6UWF7	544 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	RPS19BP1	Q86WX3	136 aa	Known RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PDSS2	Q86YH6	399 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	CRLF3	Q8IUI8	442 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	LURAP1L	Q8IV03	231 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	C7orf57	Q8NEG2	295 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	ADAMTS18	Q8TE60	1221 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	THAP3	Q8WTV1	239 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	TSNARE1	Q96NA8	513 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	RBCK1	Q9BYM8	510 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	GPAM	Q9HCL2	828 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PRM3	Q9NNZ6	103 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	PRDM9	Q9NQV7	894 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	LRFN1	Q9P244	771 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SH2B3	Q9UQQ2	575 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	SLC22A14	Q9Y267	594 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	OARD1	Q9Y530	152 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	CRYBG3	Q68DQ2	2970 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	MYO7B	Q6PIF6	2116 aa		13.63	□□□□□ -0.23
SIL1-204	ENST00000503732	ANKDD1B	A6NHY2	528 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	FAM227A	F5H4B4	570 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	SLC19A2	O60779	497 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	CA7	P43166	264 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	CYB561	P49447	251 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	REEP5	Q00765	189 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	POU4F1	Q01851	419 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	TGM3	Q08188	693 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	MAPKAPK3	Q16644	382 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	SP5	Q6BEB4	398 aa	Predicted RBP	13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	SLC25A25	Q6KCM7	469 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	TRMT10B	Q6PF06	316 aa	Known RBP	13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	XKRX	Q6PP77	449 aa		13.62	□□□□□ -0.23
SIL1-204	ENST00000503732	SBSN	Q6UWP8	590 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms