RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 B4GALT2O60909 372 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 HOXB4P17483 251 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 TFEBP19484 476 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 TPSB2P20231 275 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 PTMSP20962 102 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 CHRNB4P30926 498 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 DNAJA1P31689 397 aaKnown RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 BTG2P78543 158 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 MEF2AQ02078 507 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 HERC3Q15034 1050 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 TPSAB1Q15661 275 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 CCNG2Q16589 344 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 DEFB134Q4QY38 66 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 TMEM139Q8IV31 216 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 CCDC71Q8IV32 467 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 CYP4X1Q8N118 509 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 MFSD9Q8NBP5 474 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 ALKBH8Q96BT7 664 aaKnown RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF559Q9BR84 538 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 TMUB1Q9BVT8 246 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 PCBD2Q9H0N5 130 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 ATG10Q9H0Y0 220 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 DHRS7Q9Y394 339 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 MAP1AP78559 2803 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF407Q9C0G0 2248 aa13.75□□□□□ -0.21
TRAF4-212ENST00000498540 PRRC2AP48634 2157 aaKnown RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 NDUFS4O43181 175 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 PEX1O43933 1283 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 PAMP19021 973 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 MAOAP21397 527 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 JAK1P23458 1154 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 SLC1A2P43004 574 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 KCNJ1P48048 391 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF75DP51815 510 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 GPR85P60893 370 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 CDK16Q00536 496 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 DHX34Q14147 1143 aaKnown RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 EMC4Q5J8M3 183 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 TMEM211Q6ICI0 200 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 DRICH1Q6PGQ1 229 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 AGTRAPQ6RW13 159 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 C4orf22Q6V702 233 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 GSTA5Q7RTV2 222 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 C16orf52Q8NHV5 167 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF669Q96BR6 464 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 FAM129AQ9BZQ8 928 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 CCDC68Q9H2F9 335 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-212ENST00000498540 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 PDE10AQ9Y233 779 aa13.74□□□□□ -0.21
TRAF4-212ENST00000498540 KLRC4-KLRK1H3BQV0 150 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 FCHO1O14526 889 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 PRMT3O60678 531 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 PDE9AO76083 593 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 CD99P14209 185 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 ALOX12P18054 663 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 GRK3P35626 688 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 IST1P53990 364 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 NAE1Q13564 534 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 SKOR2Q2VWA4 1001 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-212ENST00000498540 QSOX2Q6ZRP7 698 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 MDGA2Q7Z553 956 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
TRAF4-212ENST00000498540 ARMC10Q8N2F6 343 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 ZFP62Q8NB50 900 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-212ENST00000498540 OR52N2Q8NGI0 321 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 RND1Q92730 232 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 SGPP1Q9BX95 441 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 DEFB126Q9BYW3 111 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 KCNN3Q9UGI6 736 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 DNAJC13O75165 2243 aa13.73□□□□□ -0.21
TRAF4-212ENST00000498540 ANKHD1Q8IWZ3 2542 aaKnown RBP13.73□□□□□ -0.21
TRAF4-212ENST00000498540 ACANP16112 2415 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 AKAP6Q13023 2319 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 IGKV3D-11A0A0A0MRZ8 115 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 ZCWPW2A0A1B0GU75 182 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 TCRBV16S1A1N1A0A5B0 115 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 A8MUA0 341 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 OR1F1O43749 312 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 CEP104O60308 925 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 HOXD4P09016 255 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-212ENST00000498540 ZNF888P0CJ79 500 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-212ENST00000498540 NPPBP16860 134 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 NUP107P57740 925 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 PMPCAQ10713 525 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 THOC5Q13769 683 aaKnown RBP13.72□□□□□ -0.21
TRAF4-212ENST00000498540 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-212ENST00000498540 ANKRD22Q5VYY1 191 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
TRAF4-212ENST00000498540 LCTLQ6UWM7 567 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms