RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ZIC1Q15915 447 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ST3GAL2Q16842 350 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 DEPDC1Q5TB30 811 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ACSM2BQ68CK6 577 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CYP20A1Q6UW02 462 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 FUNDC1Q8IVP5 155 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CARFQ8N187 725 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CREB3L4Q8TEY5 395 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CD180Q99467 661 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-209ENST00000497564 EVA1BQ9NVM1 165 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 PILRAQ9UKJ1 303 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 SCN3AQ9NY46 2000 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 NRP2O60462 931 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 MYO1DO94832 1006 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 TGFB1P01137 390 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 G6PDP11413 515 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS26A-209ENST00000497564 RASSF2P50749 326 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
VPS26A-209ENST00000497564 C21orf58P58505 322 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-209ENST00000497564 NR0B2Q15466 257 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 ADPRMQ3LIE5 342 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 AGKQ53H12 422 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 KHDRBS2Q5VWX1 349 aaKnown RBP13.54□□□□□ -0.24
VPS26A-209ENST00000497564 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 LIX1Q8N485 282 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-209ENST00000497564 TM4SF19Q96DZ7 209 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 CHRNA10Q9GZZ6 450 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 ACTL8Q9H568 366 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 PADI4Q9UM07 663 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 DLGAP4Q9Y2H0 992 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 PCDHGA1Q9Y5H4 931 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 ITPR1Q14643 2758 aa13.54□□□□□ -0.24
VPS26A-209ENST00000497564 NBEAQ8NFP9 2946 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 FAM234BA2RU67 622 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 TLCD2A6NGC4 264 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 PRMT3O60678 531 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SLC22A3O75751 556 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CAPNS1P04632 268 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CKMT1AP12532 417 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SDC1P18827 310 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 ACP1P24666 158 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 ZFP36L2P47974 494 aaKnown RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CLDN8P56748 225 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 PPP1CAP62136 330 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 DAB2P98082 770 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 DMTNQ08495 405 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SQSTM1Q13501 440 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CAMK2BQ13554 666 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 PWP1Q13610 501 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 RCAN2Q14206 197 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 FBXO42Q6P3S6 717 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 PAOXQ6QHF9 649 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 BLOC1S3Q6QNY0 202 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 GK5Q6ZS86 529 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SNX32Q86XE0 403 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 GLB1L3Q8NCI6 653 aaPredicted RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 OR9I1Q8NGQ6 314 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 NT5CQ8TCD5 201 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 PROKR1Q8TCW9 393 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CENPKQ9BS16 269 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 SLC25A23Q9BV35 468 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
VPS26A-209ENST00000497564 C1orf21Q9H246 121 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 LRMDAQ9H2I8 198 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 CCDC167Q9P0B6 97 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 MCM8Q9UJA3 840 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 MAPRE3Q9UPY8 281 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 KLHL20Q9Y2M5 609 aa13.53□□□□□ -0.24
VPS26A-209ENST00000497564 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.24
VPS26A-209ENST00000497564 LRIT2A6NDA9 550 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 NDUFS4O43181 175 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 B4GAT1O43505 415 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 DUX1O43812 170 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 CTSVO60911 334 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 C9P02748 559 aa13.52□□□□□ -0.25
VPS26A-209ENST00000497564 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-209ENST00000497564 CD1EP15812 388 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms