RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ROPN1Q9HAT0 212 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-213ENST00000496785 C3orf18Q9UK00 162 aa18.24■□□□□ 0.51
CTDSP1-213ENST00000496785 PCDHGA11Q9Y5H2 935 aa18.24■□□□□ 0.51
CTDSP1-213ENST00000496785 SGK494L7N484 410 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 AGPSO00116 658 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 E2F3O00716 465 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 GALR3O60755 368 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 HEXBP07686 556 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 ZNF888P0CJ79 500 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 PYGBP11216 843 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 CCT5P48643 541 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 EMP2P54851 167 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 LY6DQ14210 128 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 DEFB134Q4QY38 66 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 VWA2Q5GFL6 755 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 TRIM40Q6P9F5 258 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 PRSS41Q7RTY9 318 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 GOLGA7Q7Z5G4 137 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 PPP1R32Q7Z5V6 425 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 MYLK4Q86YV6 388 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 SLC22A9Q8IVM8 553 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 LAS2Q8IYD9 372 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 PRSS58Q8IYP2 241 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 MREGQ8N565 214 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 SRFBP1Q8NEF9 429 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 OR51Q1Q8NH59 317 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 C9orf43Q8TAL5 461 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 EPS8L3Q8TE67 593 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 UTP15Q8TED0 518 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 ATP6V1E2Q96A05 226 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 MAGEB10Q96LZ2 347 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 BBC3Q96PG8 261 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 OR1F2PQ96R84 312 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 IPPKQ9H8X2 491 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 P4HTMQ9NXG6 502 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 RAB21Q9UL25 225 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 CHD6Q8TD26 2715 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 MGAQ8IWI9 3026 aa18.23■□□□□ 0.51
CTDSP1-213ENST00000496785 IDSB3KWA1 339 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 GOLGA8RI6L899 631 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 RDH16O75452 317 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 CD22P20273 847 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 ARL1P40616 181 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 XCR1P46094 333 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 SHISA6Q6ZSJ9 500 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 ZC3H7AQ8IWR0 971 aaKnown RBP18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 EXD3Q8N9H8 876 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 CCDC126Q96EE4 140 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 CENPKQ9BS16 269 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 ROGDIQ9GZN7 287 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 SLC25A18Q9H1K4 315 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 TMEM216Q9P0N5 145 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 HCN3Q9P1Z3 774 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 RALYQ9UKM9 306 aaKnown RBP18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 GRID1Q9ULK0 1009 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 ZFYVE26Q68DK2 2539 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 NBEAQ8NFP9 2946 aa18.22■□□□□ 0.51
CTDSP1-213ENST00000496785 TLDC2A0PJX2 215 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 A8MT66 165 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PRAMEF4O60810 478 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 SIX3O95343 332 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 BMP10O95393 424 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PCNAP12004 261 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 ACPPP15309 386 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 JAK1P23458 1154 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 ATP5F1P24539 256 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 CCNG1P51959 295 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 RAB8AP61006 207 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 MAT1AQ00266 395 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 HYAL2Q12891 473 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 ADPRMQ3LIE5 342 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 TUBB8Q3ZCM7 444 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 CCDC153Q494R4 210 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 DCAF10Q5QP82 559 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 C10orf62Q5T681 223 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 MFSD4BQ5TF39 518 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PRAMEF9Q5VWM5 478 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PDSS2Q86YH6 399 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 OR2L5Q8NG80 312 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PPP4R1Q8TF05 950 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 METTL21AQ8WXB1 218 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 REXO4Q9GZR2 422 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 COPS7BQ9H9Q2 264 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 ATP13A2Q9NQ11 1180 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 C19orf25Q9UFG5 118 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 MID2Q9UJV3 735 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PCTPQ9UKL6 214 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 MKL2Q9ULH7 1088 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 ZNF490Q9ULM2 529 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 TSC22D4Q9Y3Q8 395 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 PCDHGA9Q9Y5G4 932 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 HS3ST3B1Q9Y662 390 aa18.21■□□□□ 0.51
CTDSP1-213ENST00000496785 A0A1W2PPM1 405 aa18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 LRIT2A6NDA9 550 aa18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 PSMD12O00232 456 aaPredicted RBP18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 ERI3O43414 337 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 CLDN9O95484 217 aa18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 SMIM10L1P0DMW3 83 aa18.2■□□□□ 0.5
CTDSP1-213ENST00000496785 PIK3CBP42338 1070 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms