RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 NDNQ99608 321 aa4.59□□□□□ -1.67
SF3B1-212ENST00000496458 FZD8Q9H461 694 aa4.59□□□□□ -1.67
SF3B1-212ENST00000496458 TBC1D13Q9NVG8 400 aa4.59□□□□□ -1.67
SF3B1-212ENST00000496458 GTF3C4Q9UKN8 822 aa4.59□□□□□ -1.67
SF3B1-212ENST00000496458 ZFP37Q9Y6Q3 630 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-212ENST00000496458 TNIKQ9UKE5 1360 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-212ENST00000496458 C17orf105B2RV13 164 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 GOSR1O95249 250 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 MT-ND3P03897 115 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 QDPRP09417 244 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 F3P13726 295 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 SFTPDP35247 375 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 CAPGP40121 348 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 PTGER3P43115 390 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 TDO2P48775 406 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 MZT1Q08AG7 82 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF177Q13360 481 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-212ENST00000496458 KYNUQ16719 465 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 ODF2Q5BJF6 829 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 FAM131BQ86XD5 332 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 ABHD12Q8N2K0 398 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 OR4D10Q8NGI6 311 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 MRPS27Q92552 414 aaKnown RBP4.58□□□□□ -1.68
SF3B1-212ENST00000496458 PGM2Q96G03 612 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 DNAI2Q9GZS0 605 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 RIMS4Q9H426 269 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-212ENST00000496458 GPN1Q9HCN4 374 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-212ENST00000496458 CTSZQ9UBR2 303 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 POLLQ9UGP5 575 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 BAIAP2L1Q9UHR4 511 aa4.58□□□□□ -1.68
SF3B1-212ENST00000496458 KIF21BO75037 1637 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 DISP1Q96F81 1524 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 UGGT2Q9NYU1 1516 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 SYNRGQ9UMZ2 1314 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 ACOD1A6NK06 481 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 CYTIPO60759 359 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 POP4O95707 220 aaKnown RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 STAG3L1P0CL83 205 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 HPDP32754 393 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 MTCP1P56278 107 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 OR1D5P58170 312 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 CACNG1Q06432 222 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 CD300CQ08708 224 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 TFCP2Q12800 502 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 FGD3Q5JSP0 725 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 C1orf141Q5JVX7 400 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 C11orf88Q6PI97 169 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 CNSTQ6PJW8 725 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 ENPP7Q6UWV6 458 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 ABRAXAS1Q6UWZ7 409 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 RAPH1Q70E73 1250 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 CAMKVQ8NCB2 501 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 SEPT1Q8WYJ6 367 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 EXT2Q93063 718 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 PDLIM5Q96HC4 596 aaKnown RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 GTPBP2Q9BX10 602 aaKnown RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 PUS3Q9BZE2 481 aaKnown RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 ANKRD2Q9GZV1 360 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 PARLQ9H300 379 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 FN3KQ9H479 309 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 RABEP2Q9H5N1 569 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 RNF121Q9H920 327 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 GNB4Q9HAV0 340 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 THAP10Q9P2Z0 257 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-212ENST00000496458 ATP6V0A2Q9Y487 856 aa4.57□□□□□ -1.68
SF3B1-212ENST00000496458 GOLGA3Q08378 1498 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 IGHV4-30-2A0A087WSY4 118 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 SNAP91O60641 907 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 B3GALNT1O75752 331 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 FYNP06241 537 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 TPM2P07951 284 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 DESP17661 470 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 AOC1P19801 751 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 ACAT1P24752 427 aaKnown RBP4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CLCN4P51793 760 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 RBP5P82980 135 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 BFSP1Q12934 665 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 RBBP7Q16576 425 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 MS4A18Q3C1V0 323 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 ATP1A1-AS1Q5TC04 95 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 SUSD4Q5VX71 490 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CPEB2Q7Z5Q1 589 aaKnown RBP4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CCDC91Q7Z6B0 441 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 SLFN11Q7Z7L1 901 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CCDC60Q8IWA6 550 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-212ENST00000496458 UNC45BQ8IWX7 931 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 NUP93Q8N1F7 819 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CCDC63Q8NA47 563 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 OR10G7Q8NGN6 311 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 NPRL2Q8WTW4 380 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 CHURC1Q8WUH1 139 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 RMDN1Q96DB5 314 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 NEDD4LQ96PU5 975 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF577Q9BSK1 485 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 SNX25Q9H3E2 840 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 PKD2L2Q9NZM6 624 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 C5AR2Q9P296 337 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
SF3B1-212ENST00000496458 IL16Q14005 1332 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms