RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MAGEB10Q96LZ2 347 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 C5orf34Q96MH7 638 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 NPAS2Q99743 824 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ERP44Q9BS26 406 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SLC6A16Q9GZN6 736 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 CAB39LQ9H9S4 337 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 POPDC3Q9HBV1 291 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 GPAMQ9HCL2 828 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SAYSD1Q9NPB0 183 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 OLAHQ9NV23 265 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 WHRNQ9P202 907 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 MTO1Q9Y2Z2 717 aaKnown RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 DYRK1BQ9Y463 629 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 DIDO1Q9BTC0 2240 aaKnown RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 LRBAP50851 2863 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 OR5H15A6NDH6 313 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 FAM187AA6NFU0 413 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 NDC80O14777 642 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 CHST10O43529 356 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 MAN1A2O60476 641 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 IL10P22301 178 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 AGTR2P50052 363 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 RGS1Q08116 209 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 SFT2D3Q587I9 215 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 ABHD17BQ5VST6 288 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 FCRLBQ6BAA4 426 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 PAPD4Q6PIY7 484 aaKnown RBP13.43□□□□□ -0.26
VTI1A-209ENST00000496445 ABHD13Q7L211 337 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 BEST3Q8N1M1 668 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 C17orf53Q8N3J3 647 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-209ENST00000496445 SPATA6LQ8N4H0 392 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 TBC1D19Q8N5T2 526 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 CREB3L4Q8TEY5 395 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 PYROXD1Q8WU10 500 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 RHBDF1Q96CC6 855 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 EGFL8Q99944 293 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 DERL2Q9GZP9 239 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.43□□□□□ -0.26
VTI1A-209ENST00000496445 KLHL31Q9H511 634 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 CTNNAL1Q9UBT7 734 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 OSGIN2Q9Y236 505 aa13.43□□□□□ -0.26
VTI1A-209ENST00000496445 TCRBV9S1A1TA0A576 114 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NCF1BA6NI72 391 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NCF1CA8MVU1 366 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 MAGEB17A8MXT2 336 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 PHGDHO43175 533 aaKnown RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 WDR47O94967 919 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 SMIM10L1P0DMW3 83 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NCF1P14598 390 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 HNF4AP41235 474 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 GDF5P43026 501 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 HNMTP50135 292 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 RAB8AP61006 207 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 POU4F1Q01851 419 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 SRSF11Q05519 484 aaKnown RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 USP10Q14694 798 aaKnown RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NSDHLQ15738 373 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 FRA10AC1Q70Z53 315 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 CRLF3Q8IUI8 442 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 M1APQ8TC57 530 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NR4A3Q92570 626 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
VTI1A-209ENST00000496445 SMIM10Q96HG1 83 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 RBBP8Q99708 897 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 AIF1LQ9BQI0 150 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 MMP25Q9NPA2 562 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 KCNE2Q9Y6J6 123 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 NOTCH2Q04721 2471 aa13.42□□□□□ -0.26
VTI1A-209ENST00000496445 A8MUI8 341 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 EIF3HO15372 352 aaKnown RBP eCLIP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 TAPBPO15533 448 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 LRRTM2O43300 516 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 COL8A1P27658 744 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 GMPRP36959 345 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 ST13P50502 369 aaKnown RBP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 KCNK10P57789 538 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 SLC26A5P58743 744 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 GPX6P59796 221 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 SKP1P63208 163 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 PMP22Q01453 160 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 CALCOCO2Q13137 446 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 RBBP5Q15291 538 aaKnown RBP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 TGFBIQ15582 683 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 OR4D1Q15615 310 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 ZKSCAN8Q15776 578 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 EXT1Q16394 746 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 TOR1AIP1Q5JTV8 583 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 ACER2Q5QJU3 275 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms