RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ALOX15P16050 662 aaPredicted RBP18.54■□□□□ 0.56
ATG3-208ENST00000495756 IMPG1Q17R60 797 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 TMEM214Q6NUQ4 689 aaKnown RBP18.54■□□□□ 0.56
ATG3-208ENST00000495756 Q6ZSR9 355 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 PPP1R3BQ86XI6 285 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 MARCH9Q86YJ5 346 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 ARHGEF39Q8N4T4 335 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 OR2T11Q8NH01 316 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 PPP1R36Q96LQ0 422 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 C3orf30Q96M34 536 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 CTRCQ99895 268 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 MEAF6Q9HAF1 191 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 NMRK1Q9NWW6 199 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 VPS29Q9UBQ0 182 aa18.54■□□□□ 0.56
ATG3-208ENST00000495756 SHOX2O60902 331 aaPredicted RBP18.53■□□□□ 0.56
ATG3-208ENST00000495756 ETV5P41161 510 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 EMP3P54852 163 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 RAB15P59190 212 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 C3orf38Q5JPI3 329 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 VWA5B1Q5TIE3 1220 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 TTC29Q8NA56 475 aaPredicted RBP18.53■□□□□ 0.56
ATG3-208ENST00000495756 OR2L5Q8NG80 312 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 UTP15Q8TED0 518 aaKnown RBP18.53■□□□□ 0.56
ATG3-208ENST00000495756 CENPKQ9BS16 269 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 TRIM55Q9BYV6 548 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 NPHS2Q9NP85 383 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 PISDQ9UG56 409 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 SATB2Q9UPW6 733 aa18.53■□□□□ 0.56
ATG3-208ENST00000495756 MRPS2Q9Y399 296 aaKnown RBP18.53■□□□□ 0.56
ATG3-208ENST00000495756 ATP6AP2A0A1C7CYW4 349 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 URADA6NGE7 173 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 SAP18O00422 153 aaKnown RBP18.52■□□□□ 0.56
ATG3-208ENST00000495756 ZNF749O43361 778 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 ERI3O43414 337 aaKnown RBP18.52■□□□□ 0.56
ATG3-208ENST00000495756 ATP6AP2O75787 350 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 RSL1D1O76021 490 aaKnown RBP18.52■□□□□ 0.56
ATG3-208ENST00000495756 SEMA3DO95025 777 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 TIAF1O95411 115 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 TROVE2P10155 538 aaKnown RBP eCLIP18.52■□□□□ 0.56
ATG3-208ENST00000495756 PRPH2P23942 346 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 GCGRP47871 477 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 MAPK10P53779 464 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 AQP5P55064 265 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 FAM214AQ32MH5 1076 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.52■□□□□ 0.56
ATG3-208ENST00000495756 SPDYAQ5MJ70 313 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 PRAMEF17Q5VTA0 474 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 GARNL3Q5VVW2 1013 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 CGB2Q6NT52 195 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 PWWP2BQ6NUJ5 590 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 UBE3DQ7Z6J8 389 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 ZCCHC10Q8TBK6 192 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 PMEPA1Q969W9 287 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 GAL3ST3Q96A11 431 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 RGMAQ96B86 450 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 THOC1Q96FV9 657 aaKnown RBP18.52■□□□□ 0.56
ATG3-208ENST00000495756 C10orf90Q96M02 699 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 NDC1Q9BTX1 674 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 MRPL1Q9BYD6 325 aaKnown RBP18.52■□□□□ 0.56
ATG3-208ENST00000495756 RIC8BQ9NVN3 520 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 SLC22A7Q9Y694 548 aa18.52■□□□□ 0.56
ATG3-208ENST00000495756 C4orf51C9J302 202 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 NPIPB8E9PQR5 432 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SDHDO14521 159 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SCRG1O75711 98 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 MED26O95402 600 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 ZNF888P0CJ79 500 aaPredicted RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 SMIM10L1P0DMW3 83 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 RAP1GDS1P52306 607 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 PLA2G16P53816 162 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 RAB8AP61006 207 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SNRPNP63162 240 aaKnown RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 TGM3Q08188 693 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 TBL3Q12788 808 aaKnown RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 COL9A2Q14055 689 aaPredicted RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 NR6A1Q15406 480 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 NDUFA9Q16795 377 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 MUM1Q2TAK8 710 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 DCAF12Q5T6F0 453 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 YOD1Q5VVQ6 348 aaPredicted RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 TRIM40Q6P9F5 258 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 ABHD17CQ6PCB6 329 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 EPGNQ6UW88 154 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 CEACAM20Q6UY09 585 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 ABHD13Q7L211 337 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 TMEM126BQ8IUX1 230 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SRFBP1Q8NEF9 429 aaKnown RBP18.52■□□□□ 0.55
ATG3-208ENST00000495756 RFWD2Q8NHY2 731 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SMIM10Q96HG1 83 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 TAAR9Q96RI9 348 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 C17orf62Q9BQA9 187 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SIKE1Q9BRV8 207 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 CUTCQ9NTM9 273 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 DCTN4Q9UJW0 460 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 PCDHB3Q9Y5E6 796 aa18.52■□□□□ 0.55
ATG3-208ENST00000495756 SRRM3A6NNA2 597 aaPredicted RBP18.51■□□□□ 0.55
ATG3-208ENST00000495756 PLPP1O14494 284 aa18.51■□□□□ 0.55
ATG3-208ENST00000495756 LSM1O15116 133 aaKnown RBP18.51■□□□□ 0.55
ATG3-208ENST00000495756 DIAPH2O60879 1101 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms