RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ART1P52961 327 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 ITGA8P53708 1063 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 TFF3Q07654 80 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CTBP1Q13363 440 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 PWP1Q13610 501 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 DHX34Q14147 1143 aaKnown RBP16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CES4AQ5XG92 561 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CASC4Q6P4E1 433 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CD163Q86VB7 1156 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 DMRTC2Q8IXT2 367 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CYP4X1Q8N118 509 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 MARVELD2Q8N4S9 558 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 CD200R1Q8TD46 325 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 PTCHD1Q96NR3 888 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 SARGQ9BW04 601 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 PARVBQ9HBI1 364 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 NPDC1Q9NQX5 325 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-209ENST00000495630 SAMD15Q9P1V8 674 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 SH2B3Q9UQQ2 575 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 SCN3AQ9NY46 2000 aa16.43■□□□□ 0.22
TMEM53-209ENST00000495630 ZNF860A6NHJ4 632 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 PEX1O43933 1283 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 B4GALT2O60909 372 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 DNAJB6O75190 326 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 HOXD4P09016 255 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-209ENST00000495630 ALOX12P18054 663 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 TFEBP19484 476 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 NAE1Q13564 534 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 LRRC8EQ6NSJ5 796 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 LCTLQ6UWM7 567 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 QSOX2Q6ZRP7 698 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 PIWIL4Q7Z3Z4 852 aaKnown RBP16.42■□□□□ 0.22
TMEM53-209ENST00000495630 TMEM139Q8IV31 216 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 SPNS2Q8IVW8 549 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 DENND6AQ8IWF6 608 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 LMNTD2Q8IXW0 634 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 CPNE9Q8IYJ1 553 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 ZNF740Q8NDX6 193 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 NFAM1Q8NET5 270 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-209ENST00000495630 ABHD11Q8NFV4 315 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 OR4K1Q8NGD4 311 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 MAIP1Q8WWC4 291 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 ZNF559Q9BR84 538 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 HAUS8Q9BT25 410 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 SGPP1Q9BX95 441 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 DEFB126Q9BYW3 111 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 ATG10Q9H0Y0 220 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 TP63Q9H3D4 680 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-209ENST00000495630 SLC24A3Q9HC58 644 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 FBXO6Q9NRD1 293 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-209ENST00000495630 KCNN3Q9UGI6 736 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 PDE10AQ9Y233 779 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 RNF6Q9Y252 685 aa16.42■□□□□ 0.22
TMEM53-209ENST00000495630 FAM221AA4D161 298 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 SAGE2PA6NJ88 616 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 SDR42E2A6NKP2 422 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 HS6ST1O60243 411 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 C8GP07360 202 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 CDH1P12830 882 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 MSX1P28360 303 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 MAGEA6P43360 314 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 KCNJ1P48048 391 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 CCR8P51685 355 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 DEFB134Q4QY38 66 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 UGT3A1Q6NUS8 523 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 ARHGAP11AQ6P4F7 1023 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 STRA8Q7Z7C7 330 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 PALM2Q8IXS6 379 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 ZFP62Q8NB50 900 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-209ENST00000495630 CALML6Q8TD86 181 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 UCK2Q9BZX2 261 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 PLSCR2Q9NRY7 297 aa16.41■□□□□ 0.22
TMEM53-209ENST00000495630 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ZCWPW2A0A1B0GU75 182 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 SLC16A5O15375 505 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 NDUFS4O43181 175 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 OR1F1O43749 312 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 CDC40O60508 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 DIAPH2O60879 1101 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 CD99P14209 185 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 BTG2P78543 158 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 KIAA0408Q6ZU52 694 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 CAND1Q86VP6 1230 aaKnown RBP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ARMC2Q8NEN0 867 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 EEF1AKMT1Q8WVE0 214 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ZNF669Q96BR6 464 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ALKBH8Q96BT7 664 aaKnown RBP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 AARSD1Q9BTE6 412 aaKnown RBP16.4■□□□□ 0.22
TMEM53-209ENST00000495630 TMUB1Q9BVT8 246 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 PRDM9Q9NQV7 894 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 HOMER3Q9NSC5 361 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 ADAMTS6Q9UKP5 1117 aa16.4■□□□□ 0.22
TMEM53-209ENST00000495630 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 TCRBV16S1A1N1A0A5B0 115 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms