RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PLAGL1Q9UM63 463 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 MAN2B2Q9Y2E5 1009 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 WDR37Q9Y2I8 494 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 PCDHA9Q9Y5H5 950 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 ENTPD2Q9Y5L3 495 aa9.84□□□□□ -0.83
HDAC3-214ENST00000495485 COL5A1P20908 1838 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-214ENST00000495485 TRBC2A0A5B9 178 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 KRT87PA6NCN2 255 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ISM1B1AKI9 464 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 RFXANKO14593 260 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ACOT8O14734 319 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SLC30A4O14863 429 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 GSTA4O15217 222 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 NVLO15381 856 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 HNRNPRO43390 633 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 PCDH7O60245 1069 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 CLEC3AO75596 197 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 VIPP01282 170 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 FUCA1P04066 466 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 CSF2P04141 144 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 WNT1P04628 370 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ALPPL2P10696 532 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 CDK4P11802 303 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 CSRP1P21291 193 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 GRK6P43250 576 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 TRA2BP62995 288 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 REEP5Q00765 189 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 RHDQ02161 417 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SF1Q15637 639 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 TMEM35AQ53FP2 167 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SPANXN4Q5MJ08 99 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 DEPDC1Q5TB30 811 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 STPG1Q5TH74 334 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SLC2A7Q6PXP3 512 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ADCK2Q7Z695 626 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SLC9B2Q86UD5 537 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 AMIGO1Q86WK6 493 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 C1orf52Q8N6N3 182 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 TRIML2Q8N7C3 387 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 RNF148Q8N7C7 305 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 OR13H1Q8NG92 308 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 PYDC1Q8WXC3 89 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 GTF2H4Q92759 462 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 TSACCQ96A04 125 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 RGMAQ96B86 450 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 DUS3LQ96G46 650 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 IL17FQ96PD4 163 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ACAT2Q9BWD1 397 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 RAD21L1Q9H4I0 556 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ACTL8Q9H568 366 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 YY1AP1Q9H869 796 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 POT1Q9NUX5 634 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ANKMY1Q9P2S6 941 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SPASTQ9UBP0 616 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 NKX1-2Q9UD57 310 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 BTNL2Q9UIR0 455 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 ADAM29Q9UKF5 820 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 DLGAP4Q9Y2H0 992 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 PCYT1BQ9Y5K3 369 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-214ENST00000495485 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
HDAC3-214ENST00000495485 UNC13CQ8NB66 2214 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PRSS51A0A1B0GVH4 220 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PRORSD1PA6NEY8 169 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 URADA6NGE7 173 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PATE3B3GLJ2 98 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 H7BY64 318 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 NME4O00746 187 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CDX4O14627 284 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SCAMP2O15127 329 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 OR1F1O43749 312 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 TGFB1P01137 390 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 GPIP06744 558 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 C8BP07358 591 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 FCGR1AP12314 374 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PSMA4P25789 261 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 EPHA8P29322 1005 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SLC7A1P30825 629 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 AHRP35869 848 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 DGKQP52824 942 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 LIPEQ05469 1076 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 FZD2Q14332 565 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CAPRIN1Q14444 709 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 HEPACAMQ14CZ8 416 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PLCL1Q15111 1095 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 ELOCQ15369 112 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SF3A2Q15428 464 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 ALG11Q2TAA5 492 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CCNYL2Q5T2Q4 361 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 LRIF1Q5T3J3 769 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 KHDRBS2Q5VWX1 349 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 LCN8Q6JVE9 175 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SLC30A9Q6PML9 568 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 COMMD6Q7Z4G1 85 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CAMKMTQ7Z624 323 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 TAF8Q7Z7C8 310 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PTRH1Q86Y79 214 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 RIMKLAQ8IXN7 391 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 KIAA2013Q8IYS2 634 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SLC22A18ASQ8N1D0 253 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms