RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ABHD17BQ5VST6 288 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 ADNP2Q6IQ32 1131 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 H3F3CQ6NXT2 135 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 CAPN12Q6ZSI9 719 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 STRA8Q7Z7C7 330 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 TMPRSS11BQ86T26 416 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 MDS2Q8NDY4 140 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 UTP15Q8TED0 518 aaKnown RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 PDLIM5Q96HC4 596 aaKnown RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 NAPGQ99747 312 aaPredicted RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 SLC6A16Q9GZN6 736 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 MOCS1Q9NZB8 636 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 ZFATQ9P243 1243 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 CORO1CQ9ULV4 474 aaPredicted RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 SLC22A14Q9Y267 594 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 CXorf49A8MYA2 514 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ZNHIT1O43257 154 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 CHST10O43529 356 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 PRAMEF4O60810 478 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 PRAMEF2O60811 474 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 TBX6O95947 436 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 C1QAP02745 245 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ENO2P09104 434 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 GRK3P35626 688 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 HNF4AP41235 474 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 GDF5P43026 501 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ARL4CP56559 192 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 RAB8AP61006 207 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 BTG2P78543 158 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 MGAT5Q09328 741 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 TUBA3CQ13748 450 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 USP10Q14694 798 aaKnown RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 HERC3Q15034 1050 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 NSDHLQ15738 373 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 FBXO48Q5FWF7 155 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ACER2Q5QJU3 275 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ZNF468Q5VIY5 522 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 PRAMEF9Q5VWM5 478 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 TUBA3EQ6PEY2 450 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 SYDE1Q6ZW31 735 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 THOC6Q86W42 341 aaKnown RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 SPATA6LQ8N4H0 392 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 NT5CQ8TCD5 201 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 CREB3L4Q8TEY5 395 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 LRRC39Q96DD0 335 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 VPS39Q96JC1 886 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 PDLIM2Q96JY6 352 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 OR1F2PQ96R84 312 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 KRT12Q99456 494 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 KCNK13Q9HB14 408 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 C19orf25Q9UFG5 118 aaPredicted RBP10.94□□□□□ -0.66
VTI1A-208ENST00000494728 ZFP69BQ9UJL9 534 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
VTI1A-208ENST00000494728 IGKV3D-11A0A0A0MRZ8 115 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 A0A0G2JN53 185 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 MAGEB17A8MXT2 336 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 FAM227AF5H4B4 570 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 TGFBR3LH3BV60 316 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 PHGDHO43175 533 aaKnown RBP10.93□□□□□ -0.66
VTI1A-208ENST00000494728 B4GALT2O60909 372 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 UNC5CO95185 931 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 SMIM10L1P0DMW3 83 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 MAOAP21397 527 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 SLC6A12P48065 614 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 AGTR2P50052 363 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 SLC26A5P58743 744 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 PWP1Q13610 501 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 CSHL1Q14406 222 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 ZNF766Q5HY98 468 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 NXPE4Q6UWF7 544 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 GFRALQ6UXV0 394 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 ZNF227Q86WZ6 799 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 ZBED8Q8IZ13 594 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 PLPP5Q8NEB5 264 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 GABPB2Q8TAK5 448 aaPredicted RBP10.93□□□□□ -0.66
VTI1A-208ENST00000494728 ATL1Q8WXF7 558 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 TBC1D20Q96BZ9 403 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 SMIM10Q96HG1 83 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 TMEM79Q9BSE2 394 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 TSPAN10Q9H1Z9 355 aaPredicted RBP10.93□□□□□ -0.66
VTI1A-208ENST00000494728 RHOJQ9H4E5 214 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 PELI2Q9HAT8 420 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 MMP25Q9NPA2 562 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 NECTIN3Q9NQS3 549 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 KLHL1Q9NR64 748 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 STMN3Q9NZ72 180 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 ABI3Q9P2A4 366 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 MTO1Q9Y2Z2 717 aaKnown RBP10.93□□□□□ -0.66
VTI1A-208ENST00000494728 OARD1Q9Y530 152 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 CLDN16Q9Y5I7 305 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 SAR1BQ9Y6B6 198 aa10.93□□□□□ -0.66
VTI1A-208ENST00000494728 NCF1BA6NI72 391 aaPredicted RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 NCF1CA8MVU1 366 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms