RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MAOAP21397 527 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 CCND1P24385 295 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 PTGER1P34995 402 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 MEOX1P50221 254 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 ITGA8P53708 1063 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 KRTAP10-9P60411 292 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 RHAGQ02094 409 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 HSP90AA5PQ58FG0 334 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 LRRC8EQ6NSJ5 796 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 H3F3CQ6NXT2 135 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 ABHD13Q7L211 337 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 CD163Q86VB7 1156 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 CAND1Q86VP6 1230 aaKnown RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 TMEM200AQ86VY9 491 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 LRRC56Q8IYG6 542 aaPredicted RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 TMEM156Q8N614 296 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 MFSD9Q8NBP5 474 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
UBR4-216ENST00000494503 ZNF740Q8NDX6 193 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 GABPB2Q8TAK5 448 aaPredicted RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 MAGOHBQ96A72 148 aaKnown RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 TSNARE1Q96NA8 513 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 OR1F2PQ96R84 312 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 HAUS8Q9BT25 410 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 AARSD1Q9BTE6 412 aaKnown RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 TRIM54Q9BYV2 358 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 DEFB126Q9BYW3 111 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 PARVBQ9HBI1 364 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 XAB2Q9HCS7 855 aaKnown RBP9.04□□□□□ -0.96
UBR4-216ENST00000494503 TAS2R13Q9NYV9 303 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 FBXO5Q9UKT4 447 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 FBXW2Q9UKT8 454 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 PCDHGB6Q9Y5F9 930 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
UBR4-216ENST00000494503 HIVEP1P15822 2718 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 MTORP42345 2549 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 TRBV11-1A0A0K0K1C0 115 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 A0A1B0GTH9 108 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 ASPDHA6ND91 283 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CHST10O43529 356 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 HS6ST1O60243 411 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 NME2P1O60361 137 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 NEURL1O76050 574 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CCDC175P0C221 793 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 ALOX12P18054 663 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 SAT1P21673 171 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 IL10P22301 178 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 NME2P22392 152 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 PTGS2P35354 604 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 GPR85P60893 370 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 RAB8AP61006 207 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 SP140Q13342 867 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CSHL1Q14406 222 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 RBBP5Q15291 538 aaKnown RBP9.03□□□□□ -0.96
UBR4-216ENST00000494503 PHKG1Q16816 387 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CYHR1Q6ZMK1 362 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 Q6ZPB1 254 aaPredicted RBP9.03□□□□□ -0.96
UBR4-216ENST00000494503 DOLPP1Q86YN1 238 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CYP4Z2PQ8N1L4 340 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 GPATCH11Q8N954 259 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 CCT6BQ92526 530 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 SERPINB12Q96P63 405 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 TRIM51Q9BSJ1 452 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 PNO1Q9NRX1 252 aaKnown RBP9.03□□□□□ -0.96
UBR4-216ENST00000494503 LANCL2Q9NS86 450 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 KLHL42Q9P2K6 505 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 ERVK-11Q9UQG0 969 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 ZNF835Q9Y2P0 537 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 MED16Q9Y2X0 877 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 KLF13Q9Y2Y9 288 aaPredicted RBP9.03□□□□□ -0.96
UBR4-216ENST00000494503 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 SLC22A7Q9Y694 548 aa9.03□□□□□ -0.96
UBR4-216ENST00000494503 ITPR3Q14573 2671 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 ZCWPW2A0A1B0GU75 182 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 NKX2-6A6NCS4 301 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 URADA6NGE7 173 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 SAGE2PA6NJ88 616 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 E9PLN8 166 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 KLRC4-KLRK1H3BQV0 150 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
UBR4-216ENST00000494503 GALR3O60755 368 aaPredicted RBP9.02□□□□□ -0.97
UBR4-216ENST00000494503 DNAJB6O75190 326 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 MYO1DO94832 1006 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 MLNP12872 115 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 RNH1P13489 461 aaKnown RBP9.02□□□□□ -0.97
UBR4-216ENST00000494503 CAPN3P20807 821 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 BTG2P78543 158 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 PLGLB1Q02325 96 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 DHX9Q08211 1270 aaKnown RBP9.02□□□□□ -0.97
UBR4-216ENST00000494503 MYBPHQ13203 477 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 RNFT1Q5M7Z0 435 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 CATSPEREQ5SY80 951 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms