RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 RNF215Q9Y6U7 377 aa6.82□□□□□ -1.32
EPHA3-203ENST00000494014 FAM240BA0A1B0GVZ2 78 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MYO1GB0I1T2 1018 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 KRBOX1C9JBD0 128 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 HRO43593 1189 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 DPM1O60762 260 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ADAM11O75078 769 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 OR4F21O95013 312 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TGM6O95932 706 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TSPAN19P0C672 248 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 HSMCR30P0CW71 290 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CXCL8P10145 99 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PTBP1P26599 531 aaKnown RBP eCLIP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MAOBP27338 520 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CD52P31358 61 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 GPC1P35052 558 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NUP62P37198 522 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 RPS19P39019 145 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CLCNKAP51800 687 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TPI1P60174 286 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 BTN1A1Q13410 526 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 POU4F3Q15319 338 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 HSD17B12Q53GQ0 312 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 RUNDC3AQ59EK9 446 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ATF7IP2Q5U623 682 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FAM219BQ5XKK7 198 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 OR4F3Q6IEY1 312 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TFAP2EQ6VUC0 442 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CFAP77Q6ZQR2 320 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MRPL10Q7Z7H8 261 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 BBS7Q8IWZ6 715 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TP53INP2Q8IXH6 220 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FBXO39Q8N4B4 442 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CPA6Q8N4T0 437 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 SLC37A3Q8NCC5 494 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 DENND6BQ8NEG7 585 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NTAN1Q96AB6 310 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 AHCYL2Q96HN2 611 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NSUN5Q96P11 429 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ATOH8Q96SQ7 321 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TMEM175Q9BSA9 504 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TAPBPLQ9BX59 468 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 C1QTNF3Q9BXJ4 246 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 SHARPINQ9H0F6 387 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MCCC2Q9HCC0 563 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PTPRHQ9HD43 1115 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 EMC7Q9NPA0 242 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FANCFQ9NPI8 374 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NRBP2Q9NSY0 501 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TMLHEQ9NVH6 421 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CNOT2Q9NZN8 540 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FAM8A1Q9UBU6 413 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 SLC2A6Q9UGQ3 507 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 KIF25Q9UIL4 384 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ADAM30Q9UKF2 790 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ZNF490Q9ULM2 529 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 VPS9D1Q9Y2B5 631 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PCDHGB7Q9Y5F8 929 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PRRC2BQ5JSZ5 2229 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PRSS44E7EML9 344 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ZNF670-ZNF695F2Z2N8 137 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ACSL4O60488 711 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CCNDBP1O95273 360 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 GLP2RO95838 553 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 JCHAINP01591 159 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PROS1P07225 676 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 STSP08842 583 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MTHFD2P13995 350 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 HOXA1P49639 335 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 MAP2K6P52564 334 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PTPN5P54829 565 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 POLR2GP62487 172 aaKnown RBP eCLIP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ZXDAP98168 799 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PYDC2Q56P42 97 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 DDI2Q5TDH0 399 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 TMEM207Q6UWW9 146 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 EIF3MQ7L2H7 374 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 LIMS2Q7Z4I7 341 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FAM124AQ86V42 546 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CALHM3Q86XJ0 350 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 UBALD2Q8IYN6 164 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 DEFB106AQ8N104 65 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CHCHD4Q8N4Q1 142 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 LRRC17Q8N6Y2 441 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CLDN22Q8N7P3 220 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FAM120BQ96EK7 910 aaKnown RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 DIRAS2Q96HU8 199 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 EXOC2Q96KP1 924 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 FICDQ9BVA6 458 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 NFKBIZQ9BYH8 718 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 BARHL1Q9BZE3 327 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 REEP1Q9H902 201 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
EPHA3-203ENST00000494014 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
EPHA3-203ENST00000494014 PCDHB7Q9Y5E2 793 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms