RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 WBP2Q969T9 261 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 LGALS12Q96DT0 336 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 CCDC51Q96ER9 411 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 SCMH1Q96GD3 660 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 GPR137Q96N19 417 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ALKBH7Q9BT30 221 aaPredicted RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 NTMT1Q9BV86 223 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF416Q9BWM5 594 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 RNF121Q9H920 327 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 FKRPQ9H9S5 495 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 FARSBQ9NSD9 589 aaKnown RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 TRNAU1APQ9NX07 287 aaKnown RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ATXN10Q9UBB4 475 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ZNHIT2Q9UHR6 403 aa4.09□□□□□ -1.75
GTF3A-208ENST00000493903 MRPS7Q9Y2R9 242 aaKnown RBP4.09□□□□□ -1.75
GTF3A-208ENST00000493903 ABCA9Q8IUA7 1624 aa4.09□□□□□ -1.76
GTF3A-208ENST00000493903 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CTAGE9A4FU28 777 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 LINC01553A4QN01 128 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ANKRD61A6NGH8 418 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TNFRSF13BO14836 293 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CHADO15335 359 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MAGEB3O15480 346 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 GLUD1P00367 558 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 YES1P07947 543 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 NUDT17P0C025 328 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CTAGE8P0CG41 777 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CALCBP10092 127 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 F3P13726 295 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 PRF1P14222 555 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ANPEPP15144 967 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 GOT1P17174 413 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 PSMA5P28066 241 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 PBLDP30039 288 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 HSPA1LP34931 641 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CETN2P41208 172 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TNFRSF4P43489 277 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MMP13P45452 471 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 GLUD2P49448 558 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MAZP56270 477 aaKnown RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CLDN17P56750 224 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 BNC1Q01954 994 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 HSF2Q03933 536 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SLC20A2Q08357 652 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TAF10Q12962 218 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MSLNQ13421 630 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 OPCMLQ14982 345 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 KRT31Q15323 416 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TMEM41BQ5BJD5 291 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SLC35D3Q5M8T2 416 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 IL23RQ5VWK5 629 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 NKAIN2Q5VXU1 208 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MORN5Q5VZ52 161 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 C15orf52Q6ZUT6 534 aaKnown RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ADHFE1Q8IWW8 467 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CTAGE4Q8IX94 777 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MUC20Q8N307 709 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CERS5Q8N5B7 392 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 FAM133AQ8N9E0 248 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 BANPQ8N9N5 519 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 RNF149Q8NC42 400 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 OR10T2Q8NGX3 314 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 OR52N5Q8NH56 324 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 UBTD2Q8WUN7 234 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 PHLDA1Q8WV24 401 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 RTP3Q9BQQ7 232 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ANP32EQ9BTT0 268 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TRAF4Q9BUZ4 470 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SIGLEC1Q9BZZ2 1709 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TRIM6Q9C030 488 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 RBM38Q9H0Z9 239 aaKnown RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 GANQ9H2C0 597 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 DPEP3Q9H4B8 488 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 RMND5AQ9H871 391 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MARCH7Q9H992 704 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 COG4Q9H9E3 785 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 ROPN1Q9HAT0 212 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 APOBEC3GQ9HC16 384 aaKnown RBP4.08□□□□□ -1.76
GTF3A-208ENST00000493903 VAT1LQ9HCJ6 419 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 CD93Q9NPY3 652 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 FGF21Q9NSA1 209 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SLC38A7Q9NVC3 462 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 NDUFA13Q9P0J0 144 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 VPS54Q9P1Q0 977 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 IL20RAQ9UHF4 553 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 NARFQ9UHQ1 456 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SLC7A7Q9UM01 511 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 STUB1Q9UNE7 303 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 SNX6Q9UNH7 406 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 VDAC3Q9Y277 283 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 TMED7Q9Y3B3 224 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 MFHAS1Q9Y4C4 1052 aa4.08□□□□□ -1.76
GTF3A-208ENST00000493903 RAPGEF2Q9Y4G8 1499 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms