RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MAELQ96JY0 434 aaKnown RBP18.46■□□□□ 0.55
USP39-218ENST00000493829 NLNQ9BYT8 704 aa18.46■□□□□ 0.55
USP39-218ENST00000493829 SLC6A16Q9GZN6 736 aa18.46■□□□□ 0.55
USP39-218ENST00000493829 CHRNA10Q9GZZ6 450 aa18.46■□□□□ 0.55
USP39-218ENST00000493829 FANCEQ9HB96 536 aa18.46■□□□□ 0.55
USP39-218ENST00000493829 APOBEC2Q9Y235 224 aaKnown RBP18.46■□□□□ 0.55
USP39-218ENST00000493829 POLR3HQ9Y535 204 aaPredicted RBP18.46■□□□□ 0.55
USP39-218ENST00000493829 PWP1Q13610 501 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 ISXQ2M1V0 245 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 RFTN2Q52LD8 501 aaPredicted RBP18.45■□□□□ 0.54
USP39-218ENST00000493829 PRAMEF17Q5VTA0 474 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 CDCP2Q5VXM1 449 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 LARP4Q71RC2 724 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP39-218ENST00000493829 PIGWQ7Z7B1 504 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 DTWD1Q8N5C7 304 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 ZNF655Q8N720 491 aaPredicted RBP18.45■□□□□ 0.54
USP39-218ENST00000493829 AGBL5Q8NDL9 886 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 MS4A6EQ96DS6 147 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 SEC16BQ96JE7 1060 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 PPP3R2Q96LZ3 170 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 C1orf109Q9NX04 203 aa18.45■□□□□ 0.54
USP39-218ENST00000493829 SIDT1Q9NXL6 827 aaKnown RBP18.45■□□□□ 0.54
USP39-218ENST00000493829 SERTM1A2A2V5 107 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 PLPP1O14494 284 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 VPS4BO75351 444 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CEACAM1P13688 526 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CCKBRP32239 447 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 STXBP1P61764 594 aaKnown RBP18.44■□□□□ 0.54
USP39-218ENST00000493829 ACSM2AQ08AH3 577 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 TBL3Q12788 808 aaKnown RBP18.44■□□□□ 0.54
USP39-218ENST00000493829 C6orf136Q5SQH8 315 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 DEPDC1Q5TB30 811 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ACSM2BQ68CK6 577 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 COMMD6Q7Z4G1 85 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ACTRT2Q8TDY3 377 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ZNF501Q96CX3 271 aaPredicted RBP18.44■□□□□ 0.54
USP39-218ENST00000493829 CATSPER2Q96P56 530 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CTRCQ99895 268 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CENPKQ9BS16 269 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 STRADBQ9C0K7 418 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CLCA2Q9UQC9 943 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 PMS2P1A4D2B8 440 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 SRPX2O60687 465 aaPredicted RBP18.44■□□□□ 0.54
USP39-218ENST00000493829 CCL4P13236 92 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 LBPP18428 481 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 IL1RNP18510 177 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 SSR2P43308 183 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ITGA1P56199 1179 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ACY1Q03154 408 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CUL3Q13618 768 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 TRIM40Q6P9F5 258 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 FOXR1Q6PIV2 292 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 PRSS41Q7RTY9 318 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 UBE3DQ7Z6J8 389 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 ZFAND4Q86XD8 727 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 MARCH9Q86YJ5 346 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 METTL27Q8N6F8 245 aaPredicted RBP18.44■□□□□ 0.54
USP39-218ENST00000493829 CEP70Q8NHQ1 597 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 CDC26Q8NHZ8 85 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 SLC45A3Q96JT2 553 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 DEPDC7Q96QD5 511 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 APMAPQ9HDC9 416 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 NMRK1Q9NWW6 199 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 PSD3Q9NYI0 1048 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 LOXL2Q9Y4K0 774 aa18.44■□□□□ 0.54
USP39-218ENST00000493829 FAM149AA5PLN7 773 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 ZNF860A6NHJ4 632 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 ZSCAN9O15535 394 aaPredicted RBP18.43■□□□□ 0.54
USP39-218ENST00000493829 MED26O95402 600 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 ALDOCP09972 364 aaKnown RBP18.43■□□□□ 0.54
USP39-218ENST00000493829 PRR35P0CG20 571 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 NCF2P19878 526 aaPredicted RBP18.43■□□□□ 0.54
USP39-218ENST00000493829 PRTGQ2VWP7 1150 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 ADPRMQ3LIE5 342 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 DEFB134Q4QY38 66 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 TMEM35AQ53FP2 167 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 TCTE1Q5JU00 501 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 TMEM214Q6NUQ4 689 aaKnown RBP18.43■□□□□ 0.54
USP39-218ENST00000493829 HOMEZQ8IX15 550 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 GPR135Q8IZ08 494 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 OR2L5Q8NG80 312 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 OR8K5Q8NH50 307 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 UTP15Q8TED0 518 aaKnown RBP18.43■□□□□ 0.54
USP39-218ENST00000493829 GAL3ST3Q96A11 431 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 RGMAQ96B86 450 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 C10orf90Q96M02 699 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 ZNF285Q96NJ3 590 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 CCDC28BQ9BUN5 200 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 LHX9Q9NQ69 397 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 HEY2Q9UBP5 337 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 PPT2Q9UMR5 302 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 DLGAP4Q9Y2H0 992 aa18.43■□□□□ 0.54
USP39-218ENST00000493829 EEDO75530 441 aaKnown RBP18.42■□□□□ 0.54
USP39-218ENST00000493829 KCNK5O95279 499 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 KLK1P06870 262 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 ITIH1P19827 911 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 CERS1P27544 350 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 DIO3P55073 304 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 NME5P56597 212 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 ERVK-8P63133 956 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms