RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRAMEF18Q5VWM3 479 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LIPMQ5VYY2 423 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LRRC66Q68CR7 880 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NPNTQ6UXI9 565 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 TRIM69Q86WT6 500 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 DCUN1D3Q8IWE4 304 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PAPD5Q8NDF8 572 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 OR2T35Q8NGX2 323 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 MOSPD2Q8NHP6 518 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IL31RAQ8NI17 732 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 TCTEX1D2Q8WW35 142 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 REPS1Q96D71 796 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 EBNA1BP2Q99848 306 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NTMT1Q9BV86 223 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 C11orf49Q9H6J7 331 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SLC39A10Q9ULF5 831 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 POFUT2Q9Y2G5 429 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 HES2Q9Y543 173 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHGC4Q9Y5F7 938 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHGA6Q9Y5G7 932 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHGA5Q9Y5G8 931 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHGA1Q9Y5H4 931 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM82A0PJX8 343 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 OR6C75A6NL08 312 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 K7ENM7 598 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 M0QYV0 167 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 KPNA3O00505 521 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SDHDO14521 159 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CHADO15335 359 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LYRM1O43325 122 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LCMT2O60294 686 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PAK4O96013 591 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 EGFP01133 1207 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ICAM1P05362 532 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PDGFRAP16234 1089 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PTPRAP18433 802 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IGFBP5P24593 272 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LCN1P31025 176 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 AVPR1AP37288 418 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CDKN2BP42772 138 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SLC1A3P43003 542 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IRF9Q00978 393 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 TLE2Q04725 743 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 MAMLD1Q13495 774 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LAPTM4AQ15012 233 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FAM189A2Q15884 450 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 EXOC3L2Q2M3D2 409 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PYCR3Q53H96 274 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NAA40Q86UY6 237 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ATCAYQ86WG3 371 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PDZD9Q8IXQ8 264 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 DNAJC5GQ8N7S2 189 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 BOLLQ8N9W6 283 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FBXL13Q8NEE6 735 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 OR5T3Q8NGG3 340 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 THAP6Q8TBB0 222 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 STK35Q8TDR2 534 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FCGR1BQ92637 280 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ROPN1LQ96C74 230 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 KLRG1Q96E93 195 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 KIF12Q96FN5 646 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SFXN2Q96NB2 322 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 BARD1Q99728 777 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 OMDQ99983 421 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NTPCRQ9BSD7 190 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PI4K2AQ9BTU6 479 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FICDQ9BVA6 458 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ASPNQ9BXN1 380 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FRMD8P1Q9BZ68 369 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 EVA1AQ9H8M9 152 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PTPRHQ9HD43 1115 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 C1orf112Q9NSG2 853 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ZFP57Q9NU63 452 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FEM1BQ9UK73 627 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 MRTO4Q9UKD2 239 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 DHRS7Q9Y394 339 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CMAHPQ9Y471 501 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ZFC3H1O60293 1989 aaKnown RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 A0A096LPI6 279 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GLYATL1P3A0A0U1RQE8 302 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OR2A25A4D2G3 310 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FAM159BA6NKW6 160 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NEDD8-MDP1E9PL57 170 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PSMD9O00233 223 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CACNB4O00305 520 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 RRP8O43159 456 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PSMD3O43242 534 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MITFO75030 526 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM127O75204 238 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 F9P00740 461 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SLC10A3P09131 477 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CSF3P09919 207 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 THEGLP0DJG4 465 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 C21orf33P30042 268 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SPRP35270 261 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms