RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PCNAP12004 261 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 COX7A2P14406 83 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 HOXB2P14652 356 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 HTR1BP28222 390 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TIA1P31483 386 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CCR8P51685 355 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CLCNKAP51800 687 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 DGKQP52824 942 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 METAP1P53582 386 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TAS2R38P59533 333 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 ZNF763Q0D2J5 394 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 BIRC2Q13490 618 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 KRT33BQ14525 404 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 RABL3Q5HYI8 236 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CPTPQ5TA50 214 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 GLYATQ6IB77 296 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 LRFN4Q6PJG9 635 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CRTC3Q6UUV7 619 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TMIGD1Q6UXZ0 262 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 ZBTB49Q6ZSB9 765 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TMPRSS11BQ86T26 416 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SERPINA11Q86U17 422 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 MARVELD2Q8N4S9 558 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TRIML2Q8N7C3 387 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SMRP1Q8NCR6 262 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 HUS1BQ8NHY5 278 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SNX19Q92543 992 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SH3KBP1Q96B97 665 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 MTFMTQ96DP5 389 aaKnown RBP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 FAM120BQ96EK7 910 aaKnown RBP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 MISP3Q96FF7 219 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SIPA1Q96FS4 1042 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 ZNF764Q96H86 408 aaPredicted RBP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 REXO5Q96IC2 774 aaKnown RBP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 MSLNLQ96KJ4 702 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 PPM1MQ96MI6 270 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 RNF145Q96MT1 663 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 TMEM74Q96NL1 305 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 HBEGFQ99075 208 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 PKP2Q99959 881 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SLC39A3Q9BRY0 314 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 RHBGQ9H310 441 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 WASH6PQ9NQA3 447 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 OLAHQ9NV23 265 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 GULP1Q9UBP9 304 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 CD207Q9UJ71 328 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 PACSIN3Q9UKS6 424 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 PCDHGB4Q9UN71 923 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 AURKCQ9UQB9 309 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 SLC17A4Q9Y2C5 497 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 DLGAP4Q9Y2H0 992 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 COLEC10Q9Y6Z7 277 aa9.63□□□□□ -0.87
PRPF3-206ENST00000493553 MUC22E2RYF6 1773 aaPredicted RBP9.63□□□□□ -0.87
PRPF3-206ENST00000493553 GNG14A0A1W2PPG7 69 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 A0A1W2PQU0 124 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 PIPSLA2A3N6 862 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MAN2B1O00754 1011 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 FPGTO14772 594 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 TNFRSF10CO14798 259 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 GUCY1B2O75343 617 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 APBB3O95704 486 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 GGT1P19440 569 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MSX2P35548 267 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 GRK3P35626 688 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MAGEA8P43361 318 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 NEK2P51955 445 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 YPEL5P62699 121 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 FOLH1Q04609 750 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 EPS8Q12929 822 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 SLBPQ14493 270 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 NFE2L1Q14494 772 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MYBPC3Q14896 1274 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 IRF4Q15306 451 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 ATP6AP1Q15904 470 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 ZXDCQ2QGD7 858 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 PGS1Q32NB8 556 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 LPCAT4Q643R3 524 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 CAPRIN2Q6IMN6 1127 aaKnown RBP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 ANO7Q6IWH7 933 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 DOK6Q6PKX4 331 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 SUSD1Q6UWL2 747 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 WASH2PQ6VEQ5 465 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 TRIM74Q86UV6 250 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 IFNEQ86WN2 208 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 TRIM69Q86WT6 500 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 SPPL2CQ8IUH8 684 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 SLC30A8Q8IWU4 369 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 LRRC56Q8IYG6 542 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MICU2Q8IYU8 434 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 ADGRG5Q8IZF4 528 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 MFSD2AQ8NA29 543 aa9.62□□□□□ -0.87
PRPF3-206ENST00000493553 TP53I13Q8NBR0 393 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-206ENST00000493553 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms