RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 KLHL42Q9P2K6 505 aa12.82□□□□□ -0.36
SAMM50-204ENST00000493161 TNFRSF10DQ9UBN6 386 aa12.82□□□□□ -0.36
SAMM50-204ENST00000493161 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
SAMM50-204ENST00000493161 HCFC1P51610 2035 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 ZCWPW2A0A1B0GU75 182 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 A8MUA0 341 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 TFECO14948 347 aaPredicted RBP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 FANCGO15287 622 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 HS6ST1O60243 411 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 TOXO94900 526 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 HAUS5O94927 633 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 ENO3P13929 434 aaPredicted RBP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 NPPBP16860 134 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 MAOAP21397 527 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 SLC1A2P43004 574 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 VPS41P49754 854 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 HLCSP50747 726 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 GPR85P60893 370 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 MPP1Q00013 466 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 NAE1Q13564 534 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 PHKG1Q16816 387 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 EMC4Q5J8M3 183 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 AGTRAPQ6RW13 159 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 C17orf64Q86WR6 236 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 AGGF1Q8N302 714 aaeCLIP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 OR52N2Q8NGI0 321 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 EEF1AKMT1Q8WVE0 214 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 ZNF669Q96BR6 464 aaPredicted RBP12.81□□□□□ -0.36
SAMM50-204ENST00000493161 PTCHD1Q96NR3 888 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 SGPP1Q9BX95 441 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 TSGA10Q9BZW7 698 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 SPNS1Q9H2V7 528 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 GUCA1BQ9UMX6 200 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 VPS9D1Q9Y2B5 631 aa12.81□□□□□ -0.36
SAMM50-204ENST00000493161 NDUFS4O43181 175 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 OR1F1O43749 312 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 PEX1O43933 1283 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 NADKO95544 446 aaPredicted RBP12.8□□□□□ -0.36
SAMM50-204ENST00000493161 SERPIND1P05546 499 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 SLC35G6P0C7Q6 338 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 ZNF888P0CJ79 500 aaPredicted RBP12.8□□□□□ -0.36
SAMM50-204ENST00000493161 CD1EP15812 388 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 ALOX12P18054 663 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 PAMP19021 973 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 TFEBP19484 476 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 IL10P22301 178 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 CDK16Q00536 496 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 HYAL2Q12891 473 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
SAMM50-204ENST00000493161 HERC3Q15034 1050 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
SAMM50-204ENST00000493161 LILRB4Q8NHJ6 448 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 PYCR2Q96C36 320 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 PCBD2Q9H0N5 130 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 CCDC68Q9H2F9 335 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 NECTIN3Q9NQS3 549 aa12.8□□□□□ -0.36
SAMM50-204ENST00000493161 FAM237BA0A1B0GVD1 139 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 SAGE2PA6NJ88 616 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 GOLGA8MH3BSY2 632 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 CEP104O60308 925 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 PRMT3O60678 531 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 FGGP02679 453 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 MSX1P28360 303 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 MAGEA6P43360 314 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 PGGT1BP53609 377 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 CATSPEREQ5SY80 951 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 LCTLQ6UWM7 567 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-204ENST00000493161 EID3Q8N140 333 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 ABHD11Q8NFV4 315 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 C16orf52Q8NHV5 167 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 OR4K3Q96R72 315 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 NDNQ99608 321 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 AARSD1Q9BTE6 412 aaKnown RBP12.79□□□□□ -0.36
SAMM50-204ENST00000493161 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 DEFB127Q9H1M4 99 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 RHBGQ9H310 441 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 DEPPQ9NTK1 212 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 SAMD15Q9P1V8 674 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 FBXO5Q9UKT4 447 aa12.79□□□□□ -0.36
SAMM50-204ENST00000493161 KLF13Q9Y2Y9 288 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-204ENST00000493161 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 TRBV11-1A0A0K0K1C0 115 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 TCRBV16S1A1N1A0A5B0 115 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 C4orf51C9J302 202 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 HOXB4P17483 251 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-204ENST00000493161 JAK1P23458 1154 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 CHRNB4P30926 498 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 DNAJA1P31689 397 aaKnown RBP12.78□□□□□ -0.36
SAMM50-204ENST00000493161 GRK3P35626 688 aa12.78□□□□□ -0.36
SAMM50-204ENST00000493161 HNF4AP41235 474 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms