RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ZC3H3Q8IXZ2 948 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 KIRREL3Q8IZU9 778 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CRYBG2Q8N1P7 616 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 COMMD1Q8N668 190 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 C12orf76Q8N812 135 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 KIAA0895Q8NCT3 520 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CADM4Q8NFZ8 388 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 C9orf43Q8TAL5 461 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 SLC2A12Q8TD20 617 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MITD1Q8WV92 249 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 TSEN15Q8WW01 171 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 MAIP1Q8WWC4 291 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 DNAJC9Q8WXX5 260 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 KIFAP3Q92845 792 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PPP1R14BQ96C90 147 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MCRS1Q96EZ8 462 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 LINC00615Q96LM1 132 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 MAGEB18Q96M61 343 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ZNF558Q96NG5 402 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PCDHB18PQ96TA0 734 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CYTH2Q99418 400 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 RGPD5Q99666 1765 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PRMT1Q99873 361 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 SRSF8Q9BRL6 282 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 NTMT1Q9BV86 223 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 C1QTNF1Q9BXJ1 281 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MIS12Q9H081 205 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 DDX47Q9H0S4 455 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 ATG10Q9H0Y0 220 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 NEUROG2Q9H2A3 272 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 RPF1Q9H9Y2 349 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 TREM1Q9NP99 234 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 KCNK9Q9NPC2 374 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SAR1AQ9NR31 198 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SLC39A1Q9NY26 324 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 NKIRAS1Q9NYS0 192 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 KLHL9Q9P2J3 617 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 HEY2Q9UBP5 337 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 IL17BQ9UHF5 180 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SNX7Q9UNH6 387 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PCDHA10Q9Y5I2 948 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 GLI3P10071 1580 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 DUOX1Q9NRD9 1551 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PFASO15067 1338 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PCDH11YQ9BZA8 1340 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 A0A1W2PPW3 197 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ESYT2A0FGR8 921 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 MAGEA13PA6NCF6 341 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 LRRC3CA6NJW4 275 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 OR6C75A6NL08 312 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 TTC34A8MYJ7 566 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 TCP11X1B4DZS4 312 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 K7EQM0 130 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 M0QZQ0 153 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 LGALS8O00214 317 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PSMD11O00231 422 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 HS3ST1O14792 307 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 LSM1O15116 133 aaKnown RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 SMAD9O15198 467 aaKnown RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 ALOX15BO15296 676 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PROP1O75360 226 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 MED24O75448 989 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 NDUFS3O75489 264 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 TOM1L1O75674 476 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 OR5F1O95221 314 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ZWINTO95229 277 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 CER1O95813 267 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 TRUB2O95900 331 aaKnown RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 SLC16A8O95907 504 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 MT-CO3P00414 261 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 SERPINA3P01011 423 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 GH1P01241 217 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 IGHEP01854 428 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 KRT19P08727 400 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 CYP19A1P11511 503 aaPredicted RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 TCF4P15884 667 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PRKACAP17612 351 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 MMP8P22894 467 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 POU1F1P28069 291 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PKLRP30613 574 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 THBS4P35443 961 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 VHLP40337 213 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ALDH3B1P43353 468 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 KCNJ1P48048 391 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 SLC11A1P49279 550 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 JAK3P52333 1124 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 SMSP52788 366 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ATP12AP54707 1039 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 AIF1P55008 147 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ELLP55199 621 aaPredicted RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 EFNB1P98172 346 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PDE1BQ01064 536 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 CAV1Q03135 178 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 SPP2Q13103 211 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 BTG3Q14201 252 aaPredicted RBP4.58□□□□□ -1.68
RTN4-215ENST00000491592 MFSD13AQ14CX5 517 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 PDK3Q15120 406 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 ANGPT1Q15389 498 aa4.58□□□□□ -1.68
RTN4-215ENST00000491592 SNAPC1Q16533 368 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms