RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ANKRD66B4E2M5 251 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 CR2P20023 1033 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 ERP29P30040 261 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 PKLRP30613 574 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 BNC1Q01954 994 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 MTAPQ13126 283 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 EFR3AQ14156 821 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SLC39A5Q6ZMH5 540 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 TMCO2Q7Z6W1 182 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 TP53I13Q8NBR0 393 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 WDR36Q8NI36 951 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 RNF31Q96EP0 1072 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 FRMD6Q96NE9 622 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 DHRS9Q9BPW9 319 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 PRRG3Q9BZD7 231 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 GPR62Q9BZJ7 368 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 MKRN2Q9H000 416 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 SLC6A14Q9UN76 642 aa18.63■□□□□ 0.57
SNAPC3-206ENST00000490969 ADAMDEC1O15204 470 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 ANXA8P13928 327 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 MAPK1P28482 360 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 AQP1P29972 269 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 RORCP51449 518 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 CACNG1Q06432 222 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 SMARCB1Q12824 385 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 FAPQ12884 760 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 SYCE2Q6PIF2 218 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 MBOAT1Q6ZNC8 495 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 TRIM48Q8IWZ4 208 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 CHTF18Q8WVB6 975 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 APIPQ96GX9 242 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 OPALINQ96PE5 141 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 SPON2Q9BUD6 331 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 C11orf54Q9H0W9 315 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 C12orf71A8MTZ7 269 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 STK16O75716 305 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 NUDT7P0C024 238 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 C5orf22Q49AR2 442 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 ZNF648Q5T619 568 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 NADSYN1Q6IA69 706 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.62■□□□□ 0.579e-30■■■■■ 113.3
SNAPC3-206ENST00000490969 OR52J3Q8NH60 311 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 APOLD1Q96LR9 279 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 TTLL2Q9BWV7 592 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 SNTG1Q9NSN8 517 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 NDUFAF4Q9P032 175 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 MARCH2Q9P0N8 246 aa18.62■□□□□ 0.57
SNAPC3-206ENST00000490969 PLXNA4Q9HCM2 1894 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CPSF4O95639 269 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CTPS1P17812 591 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 DGKAP23743 735 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 IL12RB1P42701 662 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 KCNQ1P51787 676 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 LIX1LQ8IVB5 337 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 TCTE3Q8IZS6 198 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 TTC9BQ8N6N2 239 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 SPPL2AQ8TCT8 520 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CMTM7Q96FZ5 175 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 UROC1Q96N76 676 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 DOHHQ9BU89 302 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 ELOVL6Q9H5J4 265 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 RNF121Q9H920 327 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 HHATLQ9HCP6 504 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CNOT2Q9NZN8 540 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 GREB1Q4ZG55 1949 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 TMEM229AB2RXF0 380 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 EPORP19235 508 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 RUNX1T1Q06455 604 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 ARHGEF7Q14155 803 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 METTL2BQ6P1Q9 378 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 BPHLQ86WA6 291 aaPredicted RBP18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 SPATA17Q96L03 361 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 ADGRE3Q9BY15 652 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 FBXO44Q9H4M3 255 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CMAHPQ9Y471 501 aa18.61■□□□□ 0.57
SNAPC3-206ENST00000490969 CHD5Q8TDI0 1954 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 SCN2BO60939 215 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 CSF2P04141 144 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 TACR2P21452 398 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 TGM4P49221 684 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 WNT3P56703 355 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 GLYR1Q49A26 553 aaPredicted RBP18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 SLC35F1Q5T1Q4 408 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 LRRC66Q68CR7 880 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 PLAG1Q6DJT9 500 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 KIAA1841Q6NSI8 718 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 FAM131AQ6UXB0 335 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 CLECL1Q8IZS7 167 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 LGI4Q8N135 537 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 YIPF7Q8N8F6 280 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 FAM181AQ8N9Y4 354 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 OR4C15Q8NGM1 316 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 BCL7CQ8WUZ0 217 aaPredicted RBP18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 BOCQ9BWV1 1114 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 ZNF717Q9BY31 904 aaPredicted RBP18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 PCM1Q15154 2024 aa18.6■□□□□ 0.57
SNAPC3-206ENST00000490969 ARHGEF9O43307 516 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms