RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	CSTL1	Q9H114	145 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LRRC4	Q9HBW1	653 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	C2orf42	Q9NWW7	574 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TBC1D7	Q9P0N9	293 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	VDAC3	Q9Y277	283 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RIPK3	Q9Y572	518 aa		4.57	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PTPRD	P23468	1912 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476		A0A0U1RQK1	487 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ELOVL7	A1L3X0	281 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF320	A2RRD8	509 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HYKK	A2RU49	373 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LILRA5	A6NI73	299 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	C15orf62	A8K5M9	175 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ANKRD66	B4E2M5	251 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNHIT1	O43257	154 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NADK	O95544	446 aa	Predicted RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RAB40AL	P0C0E4	278 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM106CP	P0CH98	169 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	STAG3L1	P0CL83	205 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF12	P17014	697 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MPZ	P25189	248 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PTPN3	P26045	913 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MAPK12	P53778	367 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	YWHAH	Q04917	246 aa	Predicted RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RUNX1T1	Q06455	604 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	DLG1	Q12959	904 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	KARS	Q15046	597 aa	Known RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CCDC142	Q17RM4	750 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NHSL2	Q5HYW2	709 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NDUFAF5	Q5TEU4	345 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TATDN1	Q6P1N9	297 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MOXD1	Q6UVY6	613 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	GFRAL	Q6UXV0	394 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SPNS3	Q6ZMD2	512 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476		Q6ZS52	159 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ASB18	Q6ZVZ8	466 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SERINC5	Q86VE9	423 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	COMMD2	Q86X83	199 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TMEM219	Q86XT9	240 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PTOV1	Q86YD1	416 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CEP57L1	Q8IYX8	460 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NUP93	Q8N1F7	819 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MOSPD2	Q8NHP6	518 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ATL1	Q8WXF7	558 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FGF11	Q92914	225 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MR1	Q95460	341 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MIB2	Q96AX9	1013 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CPNE1	Q99829	537 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	EGFL8	Q99944	293 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NTPCR	Q9BSD7	190 aa	Known RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	GTPBP2	Q9BX10	602 aa	Known RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TMEM30A	Q9NV96	361 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PTTG2	Q9NZH5	202 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	BIRC6	Q9NR09	4857 aa		4.56	□□□□□ -1.68
SSX2IP-208	ENST00000490476	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	UBE4B	O95155	1302 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZFC3H1	O60293	1989 aa	Known RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PLXND1	Q9Y4D7	1925 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HTR3E	A5X5Y0	456 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MYMK	A6NI61	221 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HNRNPCL2	B2RXH8	293 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM86B1	E9PN63	330 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CLDN4	O14493	209 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	AP5Z1	O43299	807 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	BUD23	O43709	281 aa	Known RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LDB3	O75112	727 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LIPF	P07098	398 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM86B2	P0C5J1	330 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM58BP	P0C7Q3	252 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ACP2	P11117	423 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CD22	P20273	847 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PDLIM4	P50479	330 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	POLR2L	P62875	67 aa	Known RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	KLRC3	Q07444	240 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PPP2R5C	Q13362	524 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TUBB2A	Q13885	445 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SLMAP	Q14BN4	828 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CCDC57	Q2TAC2	916 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RAB6C	Q53S08	254 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZRANB3	Q5FWF4	1079 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TCTE1	Q5JU00	501 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SFMBT2	Q5VUG0	894 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TRNP1	Q6NT89	227 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MFSD12	Q6NUT3	480 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM171B	Q6P995	826 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PLEKHM3	Q6ZWE6	761 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TMPRSS11B	Q86T26	416 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SATL1	Q86VE3	508 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SFR1	Q86XK3	245 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NAXD	Q8IW45	347 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CFAP206	Q8IYR0	622 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM3C	Q92520	227 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FIG4	Q92562	907 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NEUROG1	Q92886	237 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MUS81	Q96NY9	551 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms