RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 UBE2R2Q712K3 238 aaPredicted RBP13.06□□□□□ -0.32
VARS-227ENST00000489979 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 CILP2Q8IUL8 1156 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 CHDHQ8NE62 594 aaPredicted RBP13.06□□□□□ -0.32
VARS-227ENST00000489979 OR52N2Q8NGI0 321 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 C16orf52Q8NHV5 167 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 HES6Q96HZ4 224 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 TRIM5Q9C035 493 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 CCM2LQ9NUG4 571 aaPredicted RBP13.06□□□□□ -0.32
VARS-227ENST00000489979 SOX13Q9UN79 622 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 MED16Q9Y2X0 877 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 VPS13CQ709C8 3753 aa13.06□□□□□ -0.32
VARS-227ENST00000489979 SAGE2PA6NJ88 616 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 AP3B1O00203 1094 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 CHST10O43529 356 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 B3GALT4O96024 378 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 SLC35G6P0C7Q6 338 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 JAK1P23458 1154 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 NR0B1P51843 470 aaKnown RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 GPR85P60893 370 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 PPP2R2AP63151 447 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 FOLH1Q04609 750 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 HERC3Q15034 1050 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 KIAA0930Q6ICG6 404 aaPredicted RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 NEPROQ6NW34 567 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 ARHGAP11AQ6P4F7 1023 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 C17orf64Q86WR6 236 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 SLC13A5Q86YT5 568 aaPredicted RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 ZFP62Q8NB50 900 aaPredicted RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 ZNF740Q8NDX6 193 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 DEFB126Q9BYW3 111 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 GSX1Q9H4S2 264 aaPredicted RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 DNAJB12Q9NXW2 375 aaKnown RBP13.05□□□□□ -0.32
VARS-227ENST00000489979 KLHL42Q9P2K6 505 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
VARS-227ENST00000489979 CTAGE9A4FU28 777 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 A8MUA0 341 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 KLK8O60259 260 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 CDH1P12830 882 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ENO3P13929 434 aaPredicted RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 GRK3P35626 688 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 BTG2P78543 158 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ZNF549Q6P9A3 640 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 MBOAT1Q6ZNC8 495 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 PIWIL4Q7Z3Z4 852 aaKnown RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 MDGA2Q7Z553 956 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 CPNE9Q8IYJ1 553 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 CLYBLQ8N0X4 340 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 NFAM1Q8NET5 270 aaPredicted RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 OR5M3Q8NGP4 307 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 NINJ1Q92982 152 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 GPR21Q99679 349 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 FAM129AQ9BZQ8 928 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 ATG10Q9H0Y0 220 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 SLC24A3Q9HC58 644 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 FBXO6Q9NRD1 293 aaPredicted RBP13.04□□□□□ -0.32
VARS-227ENST00000489979 DHRS7Q9Y394 339 aa13.04□□□□□ -0.32
VARS-227ENST00000489979 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 NDUFS4O43181 175 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 FAM155BO75949 473 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 DRD2P14416 443 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 ALOX12P18054 663 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 PAMP19021 973 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
VARS-227ENST00000489979 NAE1Q13564 534 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 CEBPEQ15744 281 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 QSOX2Q6ZRP7 698 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 TMEM156Q8N614 296 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 CD200R1Q8TD46 325 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 KCNJ9Q92806 393 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 LIME1Q9H400 295 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 L3MBTL1Q9Y468 752 aa13.03□□□□□ -0.32
VARS-227ENST00000489979 TRBV11-1A0A0K0K1C0 115 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 FAM237BA0A1B0GVD1 139 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 TCRBV16S1A1N1A0A5B0 115 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 NPIPA2E9PIF3 369 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 NPIPA3F8WFD2 350 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 OR1F1O43749 312 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 CEP104O60308 925 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 AVILO75366 819 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 CTAG2O75638 210 aa13.02□□□□□ -0.33
VARS-227ENST00000489979 SERPIND1P05546 499 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms