RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	F7	P08709	466 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FGF2	P09038	288 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CNP	P09543	421 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PRR35	P0CG20	571 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	HSMCR30	P0CW71	290 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ANXA3	P12429	323 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CYP4B1	P13584	511 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	SELL	P14151	372 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	IL2RB	P14784	551 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	POU2F1	P14859	743 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	JUP	P14923	745 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	S100P	P25815	95 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ITGB7	P26010	798 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	POU1F1	P28069	291 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	HOXA9	P31269	272 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RORA	P35398	523 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CSK	P41240	450 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	EIF1	P41567	113 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CASP2	P42575	452 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MAN2A2	P49641	1150 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	STAR	P49675	285 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	GDI2	P50395	445 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	DIO3	P55073	304 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	HERVK_113	P63132	956 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PURA	Q00577	322 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RPL6	Q02878	288 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PTS	Q03393	145 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CSTF1	Q05048	431 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FGL1	Q08830	312 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PPP1R8	Q12972	351 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	NPRL3	Q12980	569 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FCN2	Q15485	313 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TCEA2	Q15560	299 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	KLHL22	Q53GT1	634 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RAB6C	Q53S08	254 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FAM76B	Q5HYJ3	339 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	NHLRC3	Q5JS37	347 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CDKL4	Q5MAI5	379 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	C10orf62	Q5T681	223 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CD276	Q5ZPR3	534 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TRIQK	Q629K1	86 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	KANK2	Q63ZY3	851 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	OR4F3	Q6IEY1	312 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TRNP1	Q6NT89	227 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FIGNL1	Q6PIW4	674 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FAM92B	Q6ZTR7	304 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PID1	Q7Z2X4	250 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	GPR149	Q86SP6	731 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TRIM69	Q86WT6	500 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	THNSL2	Q86YJ6	484 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	KRTAP1-3	Q8IUG1	177 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MCAT	Q8IVS2	390 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	LAX1	Q8IWV1	398 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ENTHD1	Q8IYW4	607 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	UBE2J2	Q8N2K1	259 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	C1orf52	Q8N6N3	182 aa	Known RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ZNF655	Q8N720	491 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	DCBLD1	Q8N8Z6	715 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	DNAAF3	Q8N9W5	541 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	UXS1	Q8NBZ7	420 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	OR8D4	Q8NGM9	314 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.6	□□□□□ -1.67	7e-13	■□□□□ 10.5
SNRNP40-206	ENST00000489853	TWIST2	Q8WVJ9	160 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	NSMAF	Q92636	917 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MTERF3	Q96E29	417 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	HRASLS5	Q96KN8	279 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PPP3R2	Q96LZ3	170 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	COQ10A	Q96MF6	247 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	BBS4	Q96RK4	519 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	LGMN	Q99538	433 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MGLL	Q99685	303 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	SOST	Q9BQB4	213 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TMEM175	Q9BSA9	504 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CINP	Q9BW66	212 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CDCA4	Q9BXL8	241 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ERVK-6	Q9BXR3	956 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RAB6C	Q9H0N0	254 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	SLC28A3	Q9HAS3	691 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ZFYVE1	Q9HBF4	777 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ABCB9	Q9NP78	766 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	RASSF1	Q9NS23	344 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	GKN1	Q9NS71	199 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	BABAM2	Q9NXR7	383 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	NLK	Q9UBE8	527 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CYP8B1	Q9UNU6	501 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	FZD1	Q9UP38	647 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CLCA3P	Q9Y6N3	262 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	CIT	O14578	2027 aa		4.6	□□□□□ -1.67
SNRNP40-206	ENST00000489853	MYO18A	Q92614	2054 aa	Known RBP	4.59	□□□□□ -1.67
SNRNP40-206	ENST00000489853	TRAV19	A0A0A6YYK7	116 aa		4.59	□□□□□ -1.67
SNRNP40-206	ENST00000489853	GLYATL1P3	A0A0U1RQE8	302 aa		4.59	□□□□□ -1.67
SNRNP40-206	ENST00000489853		A0A1W2PQL4	384 aa	Predicted RBP	4.59	□□□□□ -1.67
SNRNP40-206	ENST00000489853	ELOVL7	A1L3X0	281 aa		4.59	□□□□□ -1.67
SNRNP40-206	ENST00000489853	PMS2P1	A4D2B8	440 aa		4.59	□□□□□ -1.67

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