RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	HIST2H2AA3	Q6FI13	130 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	NDUFAF7	Q7L592	441 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	EFCAB3	Q8N7B9	438 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	EIF1AD	Q8N9N8	165 aa	Known RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	LRRN4CL	Q8ND94	238 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	CREB3L4	Q8TEY5	395 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	UBTD2	Q8WUN7	234 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	METTL21A	Q8WXB1	218 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	TM9SF4	Q92544	642 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	ISL2	Q96A47	359 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	C8orf44	Q96CB5	159 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	PTCD3	Q96EY7	689 aa	Known RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	SMAD5	Q99717	465 aa	Known RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	EFCAB11	Q9BUY7	163 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	SLC6A16	Q9GZN6	736 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	C5AR2	Q9P296	337 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	COPG2	Q9UBF2	871 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	OPTC	Q9UBM4	332 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	NSG1	A0A0A6YYJ2	146 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF860	A6NHJ4	632 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ANKDD1B	A6NHY2	528 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772		K7EPI3	171 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	MASP2	O00187	686 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	RIPK2	O43353	540 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ALOX12B	O75342	701 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	SNRPA	P09012	282 aa	Known RBP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	RBP1	P09455	135 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	FAM153B	P0C7A2	387 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	MAGEA12	P43365	314 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	RAB8A	P61006	207 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	IRF8	Q02556	426 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	LAPTM5	Q13571	262 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	DOC2A	Q14183	400 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	TBCC	Q15814	346 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	PFKFB4	Q16877	469 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	FAM153C	Q494X1	144 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	TEX35	Q5T0J7	233 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	FAAH2	Q6GMR7	532 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	CNPY4	Q8N129	248 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	OR5T3	Q8NGG3	340 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	UTP15	Q8TED0	518 aa	Known RBP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	DCAKD	Q8WVC6	231 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	CCT6B	Q92526	530 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	UBE2E3	Q969T4	207 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	WDR34	Q96EX3	536 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	GPR78	Q96P69	363 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	OR1F2P	Q96R84	312 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	VN1R1	Q9GZP7	353 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	LHPP	Q9H008	270 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	EPN3	Q9H201	632 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	CLK4	Q9HAZ1	481 aa	Known RBP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF160	Q9HCG1	818 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	PRM3	Q9NNZ6	103 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ASB1	Q9Y576	335 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	ANGPTL3	Q9Y5C1	460 aa		10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	TNPO3	Q9Y5L0	923 aa	Known RBP	10.48	□□□□□ -0.73
GGA1-222	ENST00000489772	LOC102723996	A0A087X1L8	192 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772		A0A1W2PQ72	361 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	LRIT2	A6NDA9	550 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TRIM49D1	C9J1S8	452 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	JRK	O75564	520 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	CLEC3A	O75596	197 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	COX6A1	P12074	109 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	COL6A2	P12110	1019 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	MTHFD2	P13995	350 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	EPB42	P16452	691 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	JAK1	P23458	1154 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	CASP2	P42575	452 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	AGTR2	P50052	363 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	ALDH18A1	P54886	795 aa	Known RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TLE1	Q04724	770 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	EEF1A2	Q05639	463 aa	Known RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	HYAL2	Q12891	473 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	CHIT1	Q13231	466 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	SETDB1	Q15047	1291 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TSNAXIP1	Q2TAA8	658 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TOR1AIP1	Q5JTV8	583 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	AGAP7P	Q5VUJ5	663 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TMEM205	Q6UW68	189 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	PARP9	Q8IXQ6	854 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	KBTBD2	Q8IY47	623 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	PLD6	Q8N2A8	252 aa	Known RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TBC1D20	Q96BZ9	403 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	MTBP	Q96DY7	904 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	PEX11G	Q96HA9	241 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	THOC3	Q96J01	351 aa	Known RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	FAR2	Q96K12	515 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	SCYL1	Q96KG9	808 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	AGAP4	Q96P64	663 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	CCDC77	Q9BR77	488 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	MESP1	Q9BRJ9	268 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	TXLNGY	Q9BZA5	131 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	KLHL31	Q9H511	634 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF552	Q9H707	407 aa	Predicted RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	RIC8B	Q9NVN3	520 aa		10.47	□□□□□ -0.73
GGA1-222	ENST00000489772	SPEN	Q96T58	3664 aa	Known RBP	10.47	□□□□□ -0.73
GGA1-222	ENST00000489772		A0A088AWK7	358 aa		10.46	□□□□□ -0.74
GGA1-222	ENST00000489772	IGHV1-45	A0A0A0MS14	117 aa		10.46	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms