RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CATSPEREQ5SY80 951 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 SYDE1Q6ZW31 735 aaPredicted RBP11.04□□□□□ -0.64
ACTN4-206ENST00000489451 C17orf64Q86WR6 236 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 PPIL6Q8IXY8 311 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ZNF295-AS1Q8N0V1 137 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ELP5Q8TE02 316 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ALKBH8Q96BT7 664 aaKnown RBP11.04□□□□□ -0.64
ACTN4-206ENST00000489451 LINGO1Q96FE5 620 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ZNF354BQ96LW1 612 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 OLFM1Q99784 485 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 PCBD2Q9H0N5 130 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ANKHQ9HCJ1 492 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 C19orf25Q9UFG5 118 aaPredicted RBP11.04□□□□□ -0.64
ACTN4-206ENST00000489451 ASIC3Q9UHC3 531 aa11.04□□□□□ -0.64
ACTN4-206ENST00000489451 GABRR3A8MPY1 467 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 MAGEB17A8MXT2 336 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 SLC16A5O15375 505 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 SNRPB2P08579 225 aaKnown RBP11.03□□□□□ -0.64
ACTN4-206ENST00000489451 PGAM1P18669 254 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 HSF1Q00613 529 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 NSDHLQ15738 373 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 EXT1Q16394 746 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 MEP1AQ16819 746 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 UGT3A1Q6NUS8 523 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 GDF7Q7Z4P5 450 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 GALNTL5Q7Z4T8 443 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 ANKRD53Q8N9V6 530 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 GABPB2Q8TAK5 448 aaPredicted RBP11.03□□□□□ -0.64
ACTN4-206ENST00000489451 SUN3Q8TAQ9 357 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 CALML6Q8TD86 181 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 MCOLN3Q8TDD5 553 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
ACTN4-206ENST00000489451 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 PWWP2AQ96N64 755 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 OR1F2PQ96R84 312 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 TRIM51Q9BSJ1 452 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 DDX47Q9H0S4 455 aaKnown RBP11.03□□□□□ -0.64
ACTN4-206ENST00000489451 TEKT2Q9UIF3 430 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 CLDN16Q9Y5I7 305 aa11.03□□□□□ -0.64
ACTN4-206ENST00000489451 IGKV3D-11A0A0A0MRZ8 115 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TRBC2A0A5B9 178 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 FAM227AF5H4B4 570 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 CCDC188H7C350 402 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 ADAM10O14672 748 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TTI1O43156 1089 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 NDUFS4O43181 175 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 CHST10O43529 356 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 FHP07954 510 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SLC35G6P0C7Q6 338 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 ZNF888P0CJ79 500 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SMIM10L1P0DMW3 83 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 IVDP26440 423 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 PTGER4P35408 488 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SCTRP47872 440 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 BTG2P78543 158 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 DR1Q01658 176 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 PPP1R3AQ16821 1122 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 DEFB134Q4QY38 66 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 DUPD1Q68J44 220 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 LRRC8EQ6NSJ5 796 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TRMT10BQ6PF06 316 aaKnown RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SBSNQ6UWP8 590 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 RPTNQ6XPR3 784 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SPNS3Q6ZMD2 512 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 KLHL7Q8IXQ5 586 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 MYO1HQ8N1T3 1032 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 NFAM1Q8NET5 270 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 NT5CQ8TCD5 201 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 UTP15Q8TED0 518 aaKnown RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 NEIL2Q969S2 332 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TBC1D20Q96BZ9 403 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SNF8Q96H20 258 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SMIM10Q96HG1 83 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 LPAR4Q99677 370 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 UTP23Q9BRU9 249 aaKnown RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 CDCP1Q9H5V8 836 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 TAS2R13Q9NYV9 303 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.65
ACTN4-206ENST00000489451 ASB1Q9Y576 335 aa11.02□□□□□ -0.65
ACTN4-206ENST00000489451 NPIPA5E9PKD4 350 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
ACTN4-206ENST00000489451 OR1F1O43749 312 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 B4GALT2O60909 372 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 SP1P08047 785 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 DRD2P14416 443 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 ALOX12P18054 663 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 CCND1P24385 295 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 KIR3DL1P43629 444 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 RGS4P49798 205 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 CCR8P51685 355 aa11.01□□□□□ -0.65
ACTN4-206ENST00000489451 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms