RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 RPS6KA6Q9UK32 745 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
VTI1A-207ENST00000489357 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 FADS3Q9Y5Q0 445 aa8.14□□□□□ -1.11
VTI1A-207ENST00000489357 ZFC3H1O60293 1989 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CEP192Q8TEP8 1941 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 E7EQ34 232 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 K7ESF4 209 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 DLGAP1O14490 977 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SCAMP2O15127 329 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TBX19O60806 448 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PRAMEF4O60810 478 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 MTX2O75431 263 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CREG1O75629 220 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SEMA3DO95025 777 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ALBP02768 609 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 APODP05090 189 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TFAP2AP05549 437 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 C1GALT1C1LP0DN25 315 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CKMT2P17540 419 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CD33P20138 364 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CD22P20273 847 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 C5AR1P21730 350 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ITPKAP23677 461 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 GSTM2P28161 218 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ACADLP28330 430 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TIA1P31483 386 aaKnown RBP eCLIP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ARFIP1P53367 373 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ARSFP54793 590 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TBPL1P62380 186 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 DMPKQ09013 629 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF763Q0D2J5 394 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CAMK2GQ13555 558 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 DAG1Q14118 895 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 GK3PQ14409 553 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ANGPT1Q15389 498 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PRAMEF9Q5VWM5 478 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TTC23Q5W5X9 447 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CPZQ66K79 652 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ABRAXAS1Q6UWZ7 409 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 Q6ZS52 159 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 USP51Q70EK9 711 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 HIPK1Q86Z02 1210 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TRAPPC5Q8IUR0 188 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 C1orf210Q8IVY1 113 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SLC30A8Q8IWU4 369 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 KRT78Q8N1N4 520 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RAB42Q8N4Z0 105 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 KRTCAP2Q8N6L1 136 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TRIML2Q8N7C3 387 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 IL17RCQ8NAC3 791 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 OR10A6Q8NH74 314 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 GOT1L1Q8NHS2 421 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF480Q8WV37 535 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 FAM162AQ96A26 154 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 FAM131CQ96AQ9 280 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PYCR2Q96C36 320 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 NRBF2Q96F24 287 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 APIPQ96GX9 242 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CNDP2Q96KP4 475 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 APOLD1Q96LR9 279 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 TSSK3Q96PN8 268 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 OR4K3Q96R72 315 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PANX1Q96RD7 426 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RBM4BQ9BQ04 359 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 WRAP53Q9BUR4 548 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RBM4Q9BWF3 364 aaKnown RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RAB11FIP5Q9BXF6 653 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 C1QTNF7Q9BXJ2 289 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ATG10Q9H0Y0 220 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RSPH9Q9H1X1 276 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 RAD21L1Q9H4I0 556 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PELI2Q9HAT8 420 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SGK2Q9HBY8 427 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 CCDC177Q9NQR7 707 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 AHSPQ9NZD4 102 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 GULP1Q9UBP9 304 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF282Q9UDV7 671 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ATP6V1HQ9UI12 483 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 C3orf18Q9UK00 162 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 FBXO4Q9UKT5 387 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ACSL5Q9ULC5 683 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 SUFUQ9UMX1 484 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 ANKRD12Q6UB98 2062 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 OTOGLQ3ZCN5 2332 aa8.13□□□□□ -1.11
VTI1A-207ENST00000489357 PI4KAP42356 2102 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 EP300Q09472 2414 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CCDC163A0A0D9SF12 145 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TBC1D3BA6NDS4 549 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TMEM202A6NGA9 273 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SAC3D1A6NKF1 404 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 MAGEB17A8MXT2 336 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 G3V2T6 193 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CLIC1O00299 241 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 EI24O14681 340 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms