RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CDCA3Q99618 268 aaPredicted RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 PIGQQ9BRB3 760 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 NACAP1Q9BZK3 213 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 ECHDC1Q9NTX5 307 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRN1-213ENST00000489241 OR6C2Q9NZP2 312 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 TAAR2Q9P1P5 351 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 KCNN3Q9UGI6 736 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 PSORS1C1Q9UIG5 152 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 CLCA3PQ9Y6N3 262 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 MACROD2A1Z1Q3 448 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 MTMR11A4FU01 709 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 CFAP73A6NFT4 308 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SLC15A5A6NIM6 579 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SLC28A1O00337 649 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 P2RY10O00398 339 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 MAGEB2O15479 319 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 ZNF432O94892 652 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 STBD1O95210 358 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 GUCA1CO95843 209 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 GAS8O95995 478 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 MT-ATP6P00846 226 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 TGFAP01135 160 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 IGLV2-11P01706 119 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 GHRP10912 638 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 FERP16591 822 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 DCTP40126 519 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 RGS19P49795 217 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 CLCN4P51793 760 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 HSD17B7P56937 341 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 HUNKP57058 714 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 PHEXP78562 749 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SLC3A1Q07837 685 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 CDH18Q13634 790 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 EPC2Q52LR7 807 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 PDLIM3Q53GG5 364 aaPredicted RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 XKR6Q5GH73 641 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 C12orf60Q5U649 245 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 GFI1BQ5VTD9 330 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 PRAMEF7Q5VXH5 474 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 OR6B2Q6IFH4 312 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 CD164L2Q6UWJ8 174 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 DLEU7Q6UYE1 221 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 WDR88Q6ZMY6 472 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 ISCA2Q86U28 154 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 STHQ8IWL8 128 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 ZC3H3Q8IXZ2 948 aaKnown RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 CIARTQ8N365 385 aaPredicted RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 FBXW8Q8N3Y1 598 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 GBP7Q8N8V2 638 aaPredicted RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 SIDT2Q8NBJ9 832 aaKnown RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 ZBTB44Q8NCP5 570 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 KBTBD8Q8NFY9 601 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 OR7A2PQ8NGA2 310 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 OR4A16Q8NH70 328 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 HAS2Q92819 552 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SAMD8Q96LT4 415 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 C16orf45Q96MC5 204 aaPredicted RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 NTMT1Q9BV86 223 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 ABCG4Q9H172 646 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 MMP28Q9H239 520 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 RPF1Q9H9Y2 349 aaKnown RBP3.85□□□□□ -1.79
XRN1-213ENST00000489241 ZFP57Q9NU63 452 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 PIGVQ9NUD9 493 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 TMOD3Q9NYL9 352 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 IL36AQ9UHA7 158 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SLC12A6Q9UHW9 1150 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 BLOC1S6Q9UL45 172 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 NUDCQ9Y266 331 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 SH3GLB1Q9Y371 365 aa3.85□□□□□ -1.79
XRN1-213ENST00000489241 KPNA7A9QM74 516 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 K7EPI3 171 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 KIF5CO60282 957 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 SOCS5O75159 536 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 GLRA3O75311 464 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 GRAP2O75791 330 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 DFFBO76075 338 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 TRIM16O95361 564 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 PDGFBP01127 241 aaPredicted RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 PRSS1P07477 247 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 CHRNGP07510 517 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 RBMS1P29558 406 aaKnown RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 CEACAM8P31997 349 aaPredicted RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 OR3A3P47888 321 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 HERV-K104P61576 105 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 PPP1R8Q12972 351 aaKnown RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 GPR17Q13304 367 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 RBBP5Q15291 538 aaKnown RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 INAQ16352 499 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 CCDC40Q4G0X9 1142 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 TAF1BQ53T94 588 aaPredicted RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 OR4C11Q6IEV9 310 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 C19orf48Q6RUI8 117 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 DHRS11Q6UWP2 260 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 RBM43Q6ZSC3 357 aaKnown RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 G2E3Q7L622 706 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 SLC26A9Q7LBE3 791 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 TMEM99Q8N816 258 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms