RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ARFIP1P53367 373 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 SLC18A1P54219 525 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 NAGLUP54802 743 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 OCA2Q04671 838 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 ZNF33BQ06732 778 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 LCP2Q13094 533 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 IFT88Q13099 833 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 DNASE1L3Q13609 305 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 GGTA1PQ4G0N0 100 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 UNC50Q53HI1 259 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 MLIPQ5VWP3 458 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 ZNF385CQ66K41 422 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-206ENST00000489230 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-206ENST00000489230 CCNYL1Q8N7R7 359 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 ANKRD53Q8N9V6 530 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 ARMC2Q8NEN0 867 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 OR7G3Q8NG95 312 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 CT55Q8WUE5 264 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 CCT6BQ92526 530 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 NACC2Q96BF6 587 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 MMABQ96EY8 250 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-206ENST00000489230 SLC45A3Q96JT2 553 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 WDR54Q9H977 334 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 KCNK9Q9NPC2 374 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 SEMA4BQ9NPR2 832 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-206ENST00000489230 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 SNX6Q9UNH7 406 aa11.83□□□□□ -0.52
COL4A5-206ENST00000489230 LRRC14BA6NHZ5 514 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ZNF891A8MT65 544 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 OR7A17O14581 309 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 BIRC5O15392 142 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 PRAMEF4O60810 478 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 PCNAP12004 261 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 LIFP15018 202 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ALOX12P18054 663 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 SERPINB5P36952 375 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 CDH13P55290 713 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 DSG2Q14126 1118 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 NCF4Q15080 339 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 CPSF6Q16630 551 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 AGBL2Q5U5Z8 902 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 FAM199XQ6PEV8 388 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 GPRIN3Q6ZVF9 776 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 SYVN1Q86TM6 617 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 TRPC4APQ8TEL6 797 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 VPS50Q96JG6 964 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 C10orf90Q96M02 699 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 IP6K3Q96PC2 410 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 FAM111AQ96PZ2 611 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ZNF382Q96SR6 550 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 REXO4Q9GZR2 422 aaKnown RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 SLC26A1Q9H2B4 701 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 SPNS1Q9H2V7 528 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ELOVL6Q9H5J4 265 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 EML4Q9HC35 981 aaKnown RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 AHSPQ9NZD4 102 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 ZNF282Q9UDV7 671 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-206ENST00000489230 PPT2Q9UMR5 302 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 RNF11Q9Y3C5 154 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 HEATR5BQ9P2D3 2071 aa11.82□□□□□ -0.52
COL4A5-206ENST00000489230 TERTO14746 1132 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 PCDH17O14917 1159 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 P2RX6O15547 441 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 FOXS1O43638 330 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 CREG1O75629 220 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 ESRRBO95718 433 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 IGHEP01854 428 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 KRT6AP02538 564 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 KRT6BP04259 564 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 CD22P20273 847 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 FBLP22087 321 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 TSFMP43897 325 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 OR1D4P47884 311 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 KRT6CP48668 564 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 VAC14Q08AM6 782 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 GALNT1Q10472 559 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 RCN2Q14257 317 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 SSPNQ14714 243 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 ADPRMQ3LIE5 342 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 DEPDC1Q5TB30 811 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 FRG2Q64ET8 278 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
COL4A5-206ENST00000489230 TRIM40Q6P9F5 258 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 C10orf107Q8IVU9 208 aa11.81□□□□□ -0.52
COL4A5-206ENST00000489230 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms