RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SARGQ9BW04 601 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 LRRC4CQ9HCJ2 640 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 LANCL2Q9NS86 450 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 WWOXQ9NZC7 414 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 ZFP69BQ9UJL9 534 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SLC22A7Q9Y694 548 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 KCNE2Q9Y6J6 123 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 HIVEP3Q5T1R4 2406 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 A0A0G2JN53 185 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 CHST10O43529 356 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 B4GALT2O60909 372 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 URI1O94763 535 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-206ENST00000489142 CD1DP15813 335 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 STMN1P16949 149 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 ALOX12P18054 663 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 SLC6A12P48065 614 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 HSPA7P48741 367 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 HNMTP50135 292 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 RAB10P61026 200 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 RHAGQ02094 409 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 HYAL2Q12891 473 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 DLG1Q12959 904 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.29
VTI1A-206ENST00000489142 BTBD16Q32M84 506 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 C8orf74Q6P047 294 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 SNX31Q8N9S9 440 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 GRHL3Q8TE85 626 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 CCT6BQ92526 530 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 IMMP1LQ96LU5 166 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 FAM129AQ9BZQ8 928 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 RHBGQ9H310 441 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 CD274Q9NZQ7 290 aa13.21□□□□□ -0.29
VTI1A-206ENST00000489142 SVILO95425 2214 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 DYTNA2CJ06 578 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 A8MUI8 341 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 FAM227AF5H4B4 570 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 CBX6O95503 412 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 WDPCPO95876 746 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 FHP07954 510 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 GSTA2P09210 222 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 AHRP35869 848 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 KCNC1P48547 511 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 BTG2P78543 158 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 CAV1Q03135 178 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ZNF33BQ06732 778 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
VTI1A-206ENST00000489142 BMPR2Q13873 1038 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 TLR1Q15399 786 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 NSDHLQ15738 373 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-206ENST00000489142 SFT2D3Q587I9 215 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ADNP2Q6IQ32 1131 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ABHD13Q7L211 337 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 CREB3L4Q8TEY5 395 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 LMF1Q96S06 567 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 C19orf25Q9UFG5 118 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
VTI1A-206ENST00000489142 USP9YO00507 2555 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-206ENST00000489142 ANKUB1A6NFN9 424 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 PCDH17O14917 1159 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 MAN1A2O60476 641 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 PRAMEF4O60810 478 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 SLC35E2BP0CK96 405 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 GNAZP19086 355 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 STX2P32856 288 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 SPRP35270 261 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 TSFMP43897 325 aaKnown RBP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 TNFSF10P50591 281 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 GUCY2DQ02846 1103 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 GRTP1Q5TC63 336 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 PRAMEF9Q5VWM5 478 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 KLHDC8AQ8IYD2 350 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 TBC1D20Q96BZ9 403 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 UBXN10Q96LJ8 280 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 OR1F2PQ96R84 312 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
VTI1A-206ENST00000489142 ALG9Q9H6U8 611 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 ZDHHC18Q9NUE0 388 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 DNAJC11Q9NVH1 559 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 RNF112Q9ULX5 631 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 ICE1Q9Y2F5 2266 aa13.19□□□□□ -0.3
VTI1A-206ENST00000489142 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 SUPT3HB4E1H0 165 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 CLGNO14967 610 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 CCNT2O60583 730 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms