RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ABHD17BQ5VST6 288 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 SPATA6LQ8N4H0 392 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 UTP15Q8TED0 518 aaKnown RBP21.67■■□□□ 1.06
COL9A3-213ENST00000489045 TSLPQ969D9 159 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 RHBDF1Q96CC6 855 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 MAGEB10Q96LZ2 347 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-213ENST00000489045 RBBP8Q99708 897 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 CPNE1Q99829 537 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 SLC6A16Q9GZN6 736 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 DERL2Q9GZP9 239 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 RNF32Q9H0A6 362 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.67■■□□□ 1.063e-6■■■□□ 14.6
COL9A3-213ENST00000489045 SLC5A6Q9Y289 635 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 NCF1BA6NI72 391 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 NCF1CA8MVU1 366 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 PHGDHO43175 533 aaKnown RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 CHST10O43529 356 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 FHP07954 510 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 NCF1P14598 390 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 HNF4AP41235 474 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 GDF5P43026 501 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 SLC6A12P48065 614 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 ETF1P62495 437 aaKnown RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 HYAL2Q12891 473 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 USP10Q14694 798 aaKnown RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 RBBP5Q15291 538 aaKnown RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 TGFBIQ15582 683 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 NSDHLQ15738 373 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 SFT2D3Q587I9 215 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 HIST2H2BCQ6DN03 193 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 NIPAL1Q6NVV3 410 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 KLHDC8AQ8IYD2 350 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 PLPP5Q8NEB5 264 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 TRPV3Q8NET8 790 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 TBC1D20Q96BZ9 403 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 TSPAN17Q96FV3 270 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 GPR22Q99680 433 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 TEKT2Q9UIF3 430 aa21.66■■□□□ 1.06
COL9A3-213ENST00000489045 UTP11Q9Y3A2 253 aaKnown RBP21.66■■□□□ 1.06
COL9A3-213ENST00000489045 A1L4Q6 167 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 FAM159BA6NKW6 160 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 A8MUI8 341 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 MAGEB17A8MXT2 336 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 LDLRP01130 860 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 CCDC166P0CW27 439 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 EDN3P14138 238 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 PLTPP55058 493 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 GPX6P59796 221 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 RAB8AP61006 207 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 EXT1Q16394 746 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 PAPD4Q6PIY7 484 aaKnown RBP21.65■■□□□ 1.06
COL9A3-213ENST00000489045 SYT10Q6XYQ8 523 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 C3orf62Q6ZUJ4 267 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 BCORP1Q8N888 145 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 C5orf34Q96MH7 638 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 SLX1AQ9BQ83 275 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 KLHL31Q9H511 634 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 KCNK13Q9HB14 408 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 OLAHQ9NV23 265 aa21.65■■□□□ 1.06
COL9A3-213ENST00000489045 NBPF19A0A087WUL8 3843 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 OR5H15A6NDH6 313 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 URADA6NGE7 173 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 C4orf51C9J302 202 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 C1QAP02745 245 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 GSTA2P09210 222 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 GNAZP19086 355 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 JAK1P23458 1154 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 GP5P40197 560 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 INAQ16352 499 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 TOR1AIP1Q5JTV8 583 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 FCRLBQ6BAA4 426 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 CYS1Q717R9 158 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 CCDC25Q86WR0 208 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.64■■□□□ 1.053e-6■■□□□ 12.4
COL9A3-213ENST00000489045 M1APQ8TC57 530 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 FBXO25Q8TCJ0 367 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 CREB3L4Q8TEY5 395 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 TAAR6Q96RI8 345 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 LPAR4Q99677 370 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 TMEM79Q9BSE2 394 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 PHACTR1Q9C0D0 580 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 AICDAQ9GZX7 198 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 RAB17Q9H0T7 212 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 STMN3Q9NZ72 180 aa21.64■■□□□ 1.05
COL9A3-213ENST00000489045 UNC79Q9P2D8 2635 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 B4GALT2O60909 372 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 SERPINA6P08185 405 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 C1GALT1C1LP0DN25 315 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 STMN1P16949 149 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 OR4D2P58180 307 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 CAV1Q03135 178 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 ACTN3Q08043 901 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-213ENST00000489045 SLBPQ14493 270 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL9A3-213ENST00000489045 H3F3CQ6NXT2 135 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 SLCO4C1Q6ZQN7 724 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 CTAGE3PQ8IX95 158 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 ZNF354BQ96LW1 612 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 WWOXQ9NZC7 414 aa21.63■■□□□ 1.05
COL9A3-213ENST00000489045 DIDO1Q9BTC0 2240 aaKnown RBP21.62■■□□□ 1.05
COL9A3-213ENST00000489045 WIPF3A6NGB9 483 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms