RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 DET1Q7L5Y6 550 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 AMZ2Q86W34 360 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 LMNTD2Q8IXW0 634 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 ARL10Q8N8L6 244 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 RASGEF1AQ8N9B8 481 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 AVL9Q8NBF6 648 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZNF778Q96MU6 729 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 EBNA1BP2Q99848 306 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 TINAGL1Q9GZM7 467 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CLPBQ9H078 707 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 TSPYL1Q9H0U9 437 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 OSGEPL1Q9H4B0 414 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 KLC4Q9NSK0 619 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 SACM1LQ9NTJ5 587 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 C20orf96Q9NUD7 363 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 TAAR2Q9P1P5 351 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 MTRF1LQ9UGC7 380 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 NFU1Q9UMS0 254 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 TDRD6O60522 2096 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 AHCTF1Q8WYP5 2266 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 ANKRD17O75179 2603 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 IGLV3-16A0A075B6K0 115 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR5K4A6NMS3 321 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PDZK1P1A8MUH7 402 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 B4DGG1 531 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 BTN3A1O00481 513 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 TRIM38O00635 465 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 SNX2O60749 519 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 POP7O75817 140 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 UNC5CO95185 931 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 GRPP07492 148 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 OGNP20774 298 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 IDSP22304 550 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 AK4P27144 223 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PBLDP30039 288 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 ELK3P41970 407 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 HALP42357 657 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CARSP49589 748 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CLCNKAP51800 687 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 SLC13A2Q13183 592 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 ILKQ13418 452 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 RAB32Q13637 225 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 BCL7AQ4VC05 210 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CRB2Q5IJ48 1285 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 METRNLQ641Q3 311 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 KCTD16Q68DU8 428 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PTRHD1Q6GMV3 140 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 NEPROQ6NW34 567 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PACS1Q6VY07 963 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 TMEM135Q86UB9 458 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CCDC25Q86WR0 208 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 LRRC6Q86X45 466 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PIANPQ8IYJ0 282 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 MREGQ8N565 214 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 GPR150Q8NGU9 434 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CCL4L1Q8NHW4 92 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 IL17DQ8TAD2 202 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 MAPK15Q8TD08 544 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PYROXD1Q8WU10 500 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 SNRNP27Q8WVK2 155 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 NAT6Q93015 286 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 ART4Q93070 314 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 SGF29Q96ES7 293 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CFAP36Q96G28 342 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 APOLD1Q96LR9 279 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 TRIB1Q96RU8 372 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 RUFY1Q96T51 708 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 NEU1Q99519 415 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM167BQ9BTA0 163 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 TRIM54Q9BYV2 358 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CCDC68Q9H2F9 335 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 PPANQ9NQ55 473 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 GNPTGQ9UJJ9 305 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CHMP2BQ9UQN3 213 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 KCNK6Q9Y257 313 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 DNAJC16Q9Y2G8 782 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM169AQ9Y6X4 670 aa7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZNF106Q9H2Y7 1883 aaKnown RBP7.8□□□□□ -1.16
TRAPPC12-221ENST00000489032 CPED1A4D0V7 1026 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 MGAT4DA6NG13 374 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 GOLGA8KD6RF30 607 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 H3BMM5 538 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 GOLGA8TH3BQL2 631 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 PRMT5O14744 637 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 KLK10O43240 276 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 VPS4BO75351 444 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 PRSS56P0CW18 603 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 GIMD1P0DJR0 217 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 CKMT1AP12532 417 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 PPM1FP49593 454 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 PRLHRP49683 370 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 CTSCP53634 463 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 CBX1P83916 185 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 E2F1Q01094 437 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 PLOD1Q02809 727 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 CRYMQ14894 314 aa7.79□□□□□ -1.16
TRAPPC12-221ENST00000489032 SYTL3Q4VX76 610 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms