RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 TRAV18A0A075B6X5 111 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 A0A1W2PNU3 283 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 H3BMM5 538 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 RTCAO00442 366 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 OGTO15294 1046 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 PRAF2O60831 178 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 APOA4P06727 396 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 HOXD4P09016 255 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 PCP11498 1178 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 TCF4P15884 667 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 PDGFRAP16234 1089 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 CTNNA2P26232 953 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 DUTP33316 252 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 OR3A3P47888 321 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 CDX1P47902 265 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 ZFP36L2P47974 494 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 ZNF41P51814 821 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 ZFP36L1Q07352 338 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 TNK1Q13470 666 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 GCKRQ14397 625 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 UPP1Q16831 310 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 DHRS11Q6UWP2 260 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 GPR141Q7Z602 305 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 OR5M9Q8NGP3 310 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 RAD54LQ92698 747 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 BAG1Q99933 345 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 MGME1Q9BQP7 344 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 ZNF577Q9BSK1 485 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 C10orf88Q9H8K7 445 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 JPT2Q9H910 190 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 FAM120CQ9NX05 1096 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 NCKAP1Q9Y2A7 1128 aa3.18□□□□□ -1.9
SNRNP27-205ENST00000488986 IGHV3-20A0A0C4DH32 117 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ARHGEF37A1IGU5 675 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 SHISA9B4DS77 424 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 NPIPA3F8WFD2 350 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PDHXO00330 501 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 FLRT2O43155 660 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PPIP5K2O43314 1243 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 KIF5CO60282 957 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ECE2O60344 883 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 DKC1O60832 514 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 MOCS2O96007 188 aaPredicted RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 HPP00738 406 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 RPN1P04843 607 aaKnown RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 GOT1P17174 413 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 IL4RP24394 825 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ETV5P41161 510 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 NPY4RP50391 375 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 CAPZA1P52907 286 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PPA1Q15181 289 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 TAZQ16635 292 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ZNF542PQ5EBM4 170 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ZRANB3Q5FWF4 1079 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 SHEQ5VZ18 495 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 DZIP1Q86YF9 867 aaKnown RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 TIGD4Q8IY51 512 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 NCOA7Q8NI08 942 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 HEXDCQ8WVB3 486 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 LURAP1Q96LR2 239 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ALKBH7Q9BT30 221 aaPredicted RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 INPP5KQ9BT40 448 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PAPOLGQ9BWT3 736 aaKnown RBP3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 AP1M1Q9BXS5 423 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 DPEP2Q9H4A9 486 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 PDRG1Q9NUG6 133 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 TMOD3Q9NYL9 352 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 GPR83Q9NYM4 423 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 CLIC5Q9NZA1 410 aa3.17□□□□□ -1.9
SNRNP27-205ENST00000488986 ABCA7Q8IZY2 2146 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 A0A087WV48 116 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 TRIM49BA6NDI0 452 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 PRSS46E5RG02 174 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 RNF103O00237 685 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 PGRMC2O15173 223 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 INPP4BO15327 924 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 BCL2L11O43521 198 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 GALR3O60755 368 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 VIMP08670 466 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 EEF2P13639 858 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 EDNRAP25101 427 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 CRKLP46109 303 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 LIMK2P53671 638 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 KRTAP10-8P60410 259 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 SRPXP78539 464 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 GRB14Q14449 540 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 C15orf32Q32M92 178 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 FAM46CQ5VWP2 391 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 C15orf52Q6ZUT6 534 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 TRMT11Q7Z4G4 463 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 COX8CQ7Z4L0 72 aa3.16□□□□□ -1.9
SNRNP27-205ENST00000488986 SLFN11Q7Z7L1 901 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms