RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SPANXN4Q5MJ08 99 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 VN1R5Q7Z5H4 357 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TAF8Q7Z7C8 310 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 KRTCAP2Q8N6L1 136 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 ENDOVQ8N8Q3 282 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 OR2L3Q8NG85 312 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 PRAP1Q96NZ9 151 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SRMSQ9H3Y6 488 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TMEM184CQ9NVA4 438 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 CD300AQ9UGN4 299 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 APOBEC3BQ9UH17 382 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 KLK13Q9UKR3 277 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 KNTC1P50748 2209 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 C1QTNF9BB2RNN3 333 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 FKBP6O75344 327 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SORBS2O94875 1100 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 PSMG1O95456 288 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 CER1O95813 267 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TGFB1P01137 390 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 VIPP01282 170 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 CSF2P04141 144 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 ANXA4P09525 319 aaPredicted RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 NME1P15531 152 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 JUNDP17535 347 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SLC6A2P23975 617 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 PEBP1P30086 187 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 S100A3P33764 101 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 GRK3P35626 688 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 BNIP3Q12983 259 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 PWP1Q13610 501 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 KIR2DS3Q14952 304 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 MAPKAPK3Q16644 382 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 AAGABQ6PD74 315 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 MARCH9Q86YJ5 346 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 METTL4Q8N3J2 472 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 OR4E2Q8NGC2 313 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 MIEF2Q96C03 454 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SLC39A3Q9BRY0 314 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SARGQ9BW04 601 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TOR4AQ9NXH8 423 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 AHSPQ9NZD4 102 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 TDRD6O60522 2096 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 IGKV1-8A0A0C4DH67 115 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 TLR4O00206 839 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 PCDH7O60245 1069 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 KCNH1O95259 989 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 HNRNPFP52597 415 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 SRSF11Q05519 484 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 TRAP1Q12931 704 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 TEAD4Q15561 434 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 SF1Q15637 639 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 ZNF542PQ5EBM4 170 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 PRRT3Q5FWE3 981 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 COMMD6Q7Z4G1 85 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 RBM12BQ8IXT5 1001 aaKnown RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 SLC15A3Q8IY34 581 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 ANKRD53Q8N9V6 530 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 GPR156Q8NFN8 814 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 OR52E6Q96RD3 313 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
NELFE-209ENST00000488426 MS4A8Q9BY19 250 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 OR51B5Q9H339 312 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 RMND5AQ9H871 391 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 SPHK1Q9NYA1 384 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 CPNE7Q9UBL6 633 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 SNX7Q9UNH6 387 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 PCDHA9Q9Y5H5 950 aa12.16□□□□□ -0.46
NELFE-209ENST00000488426 PRORSD1PA6NEY8 169 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 ISM1B1AKI9 464 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 NME4O00746 187 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 MAP3K7O43318 606 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 OR1F1O43749 312 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 CLEC3AO75596 197 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 HSD17B1P14061 328 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 HPCAL1P37235 193 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 ZNF763Q0D2J5 394 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 CCNIQ14094 377 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 FLOT2Q14254 428 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 TRIM25Q14258 630 aaKnown RBP12.15□□□□□ -0.46
NELFE-209ENST00000488426 GPR18Q14330 331 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
NELFE-209ENST00000488426 PLCL1Q15111 1095 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms