RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 NT5DC2Q9H857 520 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 VIPAS39Q9H9C1 493 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 KCNK9Q9NPC2 374 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 DMRT3Q9NQL9 472 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 HCN3Q9P1Z3 774 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF225Q9UK10 706 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 PADI1Q9ULC6 663 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ACTL7BQ9Y614 415 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 A0A087WV48 116 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 ANKDD1BA6NHY2 528 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SGK494L7N484 410 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 UBFD1O14562 309 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 PRPF4O43172 522 aaKnown RBP eCLIP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 ERI3O43414 337 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 UGDHO60701 494 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 CLEC3AO75596 197 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 KLHL18O94889 574 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SERPINA6P08185 405 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 TCN2P20062 427 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 AGXTP21549 392 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SERPINB4P48594 390 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 EMP3P54852 163 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 DNAJB13P59910 316 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 OLR1P78380 273 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 DCDP81605 110 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 HIST2H2ACQ16777 129 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 NDUFA9Q16795 377 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SYT16Q17RD7 645 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 FAM214AQ32MH5 1076 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 GGTA1PQ4G0N0 100 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 DEFB134Q4QY38 66 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SGO1Q5FBB7 561 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 CFAP157Q5JU67 520 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 AGBL2Q5U5Z8 902 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 GARNL3Q5VVW2 1013 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 LIPJQ5W064 366 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 HIST2H2AA3Q6FI13 130 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 LRRC69Q6ZNQ3 347 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MILR1Q7Z6M3 343 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 CDYL2Q8N8U2 506 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 AMER3Q8N944 861 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 TRPV3Q8NET8 790 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 TTLQ8NG68 377 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 HUS1BQ8NHY5 278 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MGARPQ8TDB4 240 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 UTP15Q8TED0 518 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 AGAP11Q8TF27 550 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF473Q8WTR7 871 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 UBE2E3Q969T4 207 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 COL26A1Q96A83 441 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 HBEGFQ99075 208 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MTERF1Q99551 399 aaKnown RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 SH3GL2Q99962 352 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 DPH2Q9BQC3 489 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 GATA5Q9BWX5 397 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MS4A8Q9BY19 250 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 RBCK1Q9BYM8 510 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 DPH1Q9BZG8 443 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 RHBGQ9H310 441 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 ACTL8Q9H568 366 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 CPNE5Q9HCH3 593 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MID1IP1Q9NPA3 183 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 IFT80Q9P2H3 777 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-210ENST00000488228 TRPS1Q9UHF7 1281 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 NAALAD2Q9Y3Q0 740 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 MGAQ8IWI9 3026 aa10.49□□□□□ -0.73
UBE4B-210ENST00000488228 ZFYVE26Q68DK2 2539 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 WDR91A4D1P6 747 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 LRIT2A6NDA9 550 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 H0YIV9 168 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 SAP18O00422 153 aaKnown RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 TM9SF1O15321 606 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 TRIM13O60858 407 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ZWINTO95229 277 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 NSA2O95478 260 aaKnown RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 MLYCDO95822 493 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 CHRNGP07510 517 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 BPGMP07738 259 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 DHRS4L1P0CG22 281 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ALOX12P18054 663 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 GSTM2P28161 218 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ARRB2P32121 409 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 HPDP32754 393 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 HTR6P50406 440 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 NEK2P51955 445 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 FOXA1P55317 472 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 RPS13P62277 151 aaKnown RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 IL10RAQ13651 578 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 DSG2Q14126 1118 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ATP1A1-AS1Q5TC04 95 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 CES4AQ5XG92 561 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 TTC19Q6DKK2 380 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 PRMT9Q6P2P2 845 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 SHISA6Q6ZSJ9 500 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ABHD13Q7L211 337 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 PRSS58Q8IYP2 241 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 AFAP1L2Q8N4X5 818 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms