RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ZNF574Q6ZN55 896 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 AHSA2Q719I0 299 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 RRM2BQ7LG56 351 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 C16orf62Q7Z3J2 963 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SIAH1Q8IUQ4 282 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CCDC71Q8IV32 467 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC41A1Q8IVJ1 513 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CEP97Q8IW35 865 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR8H3Q8N146 312 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 NXPE1Q8N323 547 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 STX19Q8N4C7 294 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 C1orf52Q8N6N3 182 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 FAM86B1Q8N7N1 296 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CLRN3Q8NCR9 226 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZNF548Q8NEK5 533 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR52K1Q8NGK4 314 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR8K3Q8NH51 312 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 UTP15Q8TED0 518 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CHTF18Q8WVB6 975 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ASB11Q8WXH4 323 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 LINC01599Q8WXQ3 324 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HGDQ93099 445 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 MYDGFQ969H8 173 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 RADILQ96JH8 1075 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HHIPL1Q96JK4 782 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 COL21A1Q96P44 957 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CSPG4P5Q96PW8 444 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 OMDQ99983 421 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 DPYSL5Q9BPU6 564 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 P2RY13Q9BPV8 354 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ORAI3Q9BRQ5 295 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 MARVELD1Q9BSK0 173 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 COPS4Q9BT78 406 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 C11orf84Q9BUA3 381 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 TAPBPLQ9BX59 468 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 REG4Q9BYZ8 158 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 PRRG3Q9BZD7 231 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 TRIM8Q9BZR9 551 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 PITHD1Q9GZP4 211 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HAPLN2Q9GZV7 340 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 XYLT2Q9H1B5 865 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ACTR8Q9H981 624 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 AGO4Q9HCK5 861 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 KCNH7Q9NS40 1196 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 OLA1Q9NTK5 396 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 RBFOX1Q9NWB1 397 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 GPATCH2LQ9NWQ4 482 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 MCUBQ9NWR8 336 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 PIH1D1Q9NWS0 290 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 COA4Q9NYJ1 87 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 GPRC5BQ9NZH0 403 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 FBLN5Q9UBX5 448 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 UBQLN2Q9UHD9 624 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 POLG2Q9UHN1 485 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 TINAGQ9UJW2 476 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 INVSQ9Y283 1065 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 DTX4Q9Y2E6 619 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 KCNK7Q9Y2U2 307 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 FIS1Q9Y3D6 152 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ASB4Q9Y574 426 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 DNAJC15Q9Y5T4 150 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 V9GYQ6 96 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 MYO18AQ92614 2054 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ANK1P16157 1881 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 hCG_1807616A0A1W2PRN6 198 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMEM150BA6NC51 233 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 K7ERI5 159 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 IFRD1O00458 451 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC30A4O14863 429 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 WNT9AO14904 365 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 PIP5K1BO14986 540 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 KIAA0513O60268 411 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 PMPCBO75439 489 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ATP6AP2O75787 350 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SCELO95171 688 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 TNNC2P02585 160 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SOD2P04179 222 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CYBBP04839 570 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ACSM4P0C7M7 580 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CD8BP10966 210 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HLA-EP13747 358 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ARSBP15848 533 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ITGALP20701 1170 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CYP2B6P20813 491 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HOXA9P31269 272 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 NUP62P37198 522 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CENPAP49450 140 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 MECP2P51608 486 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 KCNQ1P51787 676 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 CLCN3P51790 818 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HSPA2P54652 639 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SSTP61278 116 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 BTG1P62324 171 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HERVK_113P63132 956 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 HOXC5Q00444 222 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZNF91Q05481 1191 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 BTN1A1Q13410 526 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 EXOSC2Q13868 293 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
CDC42BPA-213ENST00000488131 SMAD1Q15797 465 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms