RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SLC22A2O15244 555 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 SEC22BO75396 215 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 OR2B3O76000 313 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 DKK1O94907 266 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TGFB1P01137 390 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 PRR35P0CG20 571 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 PRPS2P11908 318 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 EPHA3P29320 983 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TSPAN7P41732 249 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 ASMTP46597 345 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 SEPHS1P49903 392 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 HTR6P50406 440 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 ITGA1P56199 1179 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 VSX2P58304 361 aaPredicted RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RAB15P59190 212 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 STX1BP61266 288 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TRA2BP62995 288 aaKnown RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 CYP4F2P78329 520 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RPS6KA2Q15349 733 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TCHHL1Q5QJ38 904 aaPredicted RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 C6orf136Q5SQH8 315 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 WASHC2DQ5SRD0 308 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 CDCP2Q5VXM1 449 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 VN1R4Q7Z5H5 301 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TMPRSS12Q86WS5 348 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 NUDT13Q86X67 352 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 PLD3Q8IV08 490 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 KIAA2013Q8IYS2 634 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 METTL4Q8N3J2 472 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 FNDC5Q8NAU1 212 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 C7orf57Q8NEG2 295 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 DEFB124Q8NES8 71 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RFWD2Q8NHY2 731 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RTKNQ9BST9 563 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 KLHL25Q9H0H3 589 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 KCNK13Q9HB14 408 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 FGF21Q9NSA1 209 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 FARSBQ9NSD9 589 aaKnown RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RARRES3Q9UL19 164 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 CDC14AQ9UNH5 594 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 VPS13AQ96RL7 3174 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 RIF1Q5UIP0 2472 aaKnown RBP10.52□□□□□ -0.72
HDLBP-242ENST00000488013 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 COL5A1P20908 1838 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ATP6AP2A0A1C7CYW4 349 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 A8MU76 341 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 PEX11AO75192 247 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ATP6AP2O75787 350 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MT-CO3P00414 261 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 EIF2S1P05198 315 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 RPL3P39023 403 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 GABRA4P48169 554 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MRPL19P49406 292 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ATP4BP51164 291 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MTTPP55157 894 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 SIM1P81133 766 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 INSM1Q01101 510 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 HMGCS1Q01581 520 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 TUBB3Q13509 450 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ISXQ2M1V0 245 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 PRTGQ2VWP7 1150 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 SLC9B1Q4ZJI4 515 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 OR4C11Q6IEV9 310 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 CGB2Q6NT52 195 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 TMEM214Q6NUQ4 689 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ABHD17CQ6PCB6 329 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MAVSQ7Z434 540 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 VN1R5Q7Z5H4 357 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 GALNT15Q8N3T1 639 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ZCCHC7Q8N3Z6 543 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ADAMTS18Q8TE60 1221 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 CHTF18Q8WVB6 975 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 C10orf82Q8WW14 230 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MS4A6EQ96DS6 147 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 LIN37Q96GY3 246 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 LRRC37BQ96QE4 947 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 TEFMQ96QE5 360 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 NDC1Q9BTX1 674 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 NPLQ9BXD5 320 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ASPSCR1Q9BZE9 553 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 B3GNT4Q9C0J1 378 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 OR51B5Q9H339 312 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 WDR55Q9H6Y2 383 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 DDX31Q9H8H2 851 aaKnown RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 COPS7BQ9H9Q2 264 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 FBXO8Q9NRD0 319 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MS4A12Q9NXJ0 267 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 MCM8Q9UJA3 840 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 CLCA2Q9UQC9 943 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 SPACA6W5XKT8 324 aa10.52□□□□□ -0.73
HDLBP-242ENST00000488013 ARHGEF17Q96PE2 2063 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-242ENST00000488013 LOC105369274A0A096LPK9 316 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms