RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CPN2P22792 545 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 CCR4P51679 360 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 HK3P52790 923 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 TARDBPQ13148 414 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■□□□□ 9.9
TRA2B-214ENST00000487615 GRIN2CQ14957 1233 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 RAB39AQ14964 217 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 RUNDC3AQ59EK9 446 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 NXPE4Q6UWF7 544 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 LMLNQ96KR4 655 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 DOHHQ9BU89 302 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 ZBP1Q9H171 429 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 FAM118AQ9NWS6 357 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
TRA2B-214ENST00000487615 GON4LQ3T8J9 2241 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 TPST2O60704 377 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 KAT7O95251 611 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 ADH1BP00325 375 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 IL3P08700 152 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 TIMP2P16035 220 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 CD36P16671 472 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
TRA2B-214ENST00000487615 PTSQ03393 145 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 MRPL28Q13084 256 aaKnown RBP11.38□□□□□ -0.59
TRA2B-214ENST00000487615 NFE2L1Q14494 772 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 ITPRIPL2Q3MIP1 535 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 TRIQKQ629K1 86 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 KLHL35Q6PF15 583 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 GPR65Q8IYL9 337 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 OR2A12Q8NGT7 310 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 AHCYL2Q96HN2 611 aaKnown RBP11.38□□□□□ -0.59
TRA2B-214ENST00000487615 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 TNFRSF12AQ9NP84 129 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 UTS2RQ9UKP6 389 aa11.38□□□□□ -0.59
TRA2B-214ENST00000487615 NDUFS4O43181 175 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 LAMP2P13473 410 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 NT5EP21589 574 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CENPAP49450 140 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CTSCP53634 463 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 IQCCQ4KMZ1 466 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 HLA-DQA1Q5Y7H0 255 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CLMPQ9H6B4 373 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CTPS2Q9NRF8 586 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CD300AQ9UGN4 299 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 H1F0P07305 194 aaKnown RBP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 GRSF1Q12849 480 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 MTAPQ13126 283 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 LSAMPQ13449 338 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 SYT16Q17RD7 645 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 C5orf22Q49AR2 442 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 PARS2Q7L3T8 475 aaKnown RBP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 RTL10Q7L3V2 364 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 NETO1Q8TDF5 533 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 MYLIPQ8WY64 445 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 BHLHE41Q9C0J9 482 aaPredicted RBP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 GORASP2Q9H8Y8 452 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 DZANK1Q9NVP4 752 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 BTBD3Q9Y2F9 522 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 TOR1BO14657 336 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 PRAMEF12O95522 483 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CXCL10P02778 98 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CDH3P22223 829 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 OR1E2P47887 323 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 KCNC4Q03721 635 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 RFLNAQ6ZTI6 216 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 COMMD6Q7Z4G1 85 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 TUBA1CQ9BQE3 449 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 YIPF4Q9BSR8 244 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 BRF2Q9HAW0 419 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 EFCAB9A8MZ26 197 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 XPNPEP2O43895 674 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 CEBPBP17676 345 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 UQCRC2P22695 453 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 TIGD6Q17RP2 521 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 HNRNPA1L2Q32P51 320 aaKnown RBP11.37□□□□□ -0.59
TRA2B-214ENST00000487615 UNC5DQ6UXZ4 953 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 GALNT10Q86SR1 603 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF683Q8IZ20 524 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 UBTD2Q8WUN7 234 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 UBAP1Q9NZ09 502 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 ABCD2Q9UBJ2 740 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 SNX7Q9UNH6 387 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 HCN4Q9Y3Q4 1203 aa11.37□□□□□ -0.59
TRA2B-214ENST00000487615 A0A1W2PP55 124 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 C7orf72A4D263 438 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 IGLON5A6NGN9 336 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 HOXB2P14652 356 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 AKT2P31751 481 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DCTP40126 519 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 XKR7Q5GH72 579 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 TAF8Q7Z7C8 310 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 VTCN1Q7Z7D3 282 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 PIGXQ8TBF5 258 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DTD2Q96FN9 168 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 EGLN2Q96KS0 407 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ALPK1Q96QP1 1244 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms